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. 2015 Mar 12;200(1):295–308. doi: 10.1534/genetics.115.174425

Table 2. Posterior probabilities for the 15 possible four-population topologies for nongenic and genic loci.

Nongenic Genic
Topology Corrected Uncorrected Corrected Uncorrected
(((SSY,HLE)NLE)(HPI,HMO)) 0.16 0.15 0.19 0.15
((((HPI,HMO)NLE)SSY)HLE) 0.19 0.14 0.11 0.08
(((SSY,HLE)(HPI,HMO))NLE) 0.14 0.23 0.13 0.19
((((HPI,HMO)NLE)HLE)SSY) 0.13 0.11 0.06 0.05
(((NLE,HLE)SSY)(HPI,HMO)) 0.06 0.05 0.10 0.08
((((HPI,HMO)SSY)NLE)HLE) 0.07 0.06 0.08 0.07
((((HPI,HMO)SSY)HLE)NLE) 0.05 0.07 0.07 0.14
(((HPI,HMO)NLE)(SSY,HLE)) 0.05 0.04 0.05 0.03
(((NLE,SSY)HLE)(HPI,HMO)) 0.03 0.03 0.06 0.04
(((NLE,HLE)(HPI,HMO))SSY) 0.04 0.03 0.04 0.04
(((NLE,SSY)(HPI,HMO))HLE) 0.03 0.03 0.03 0.02
((((HPI,HMO)HLE)SSY)NLE) 0.02 0.04 0.03 0.06
((((HPI,HMO)HLE)NLE)SSY) 0.02 0.02 0.02 0.02
(((HPI,HMO)SSY)(NLE,HLE)) 0.01 0.01 0.03 0.02
(((HPI,HMO)HLE)(NLE,SSY)) 0.01 0.01 0.01 0.00

Boldface type indicates the topology identified using sequence divergence in Carbone et al. (2014).