Table 2. Posterior probabilities for the 15 possible four-population topologies for nongenic and genic loci.
Nongenic | Genic | |||
---|---|---|---|---|
Topology | Corrected | Uncorrected | Corrected | Uncorrected |
(((SSY,HLE)NLE)(HPI,HMO)) | 0.16 | 0.15 | 0.19 | 0.15 |
((((HPI,HMO)NLE)SSY)HLE) | 0.19 | 0.14 | 0.11 | 0.08 |
(((SSY,HLE)(HPI,HMO))NLE) | 0.14 | 0.23 | 0.13 | 0.19 |
((((HPI,HMO)NLE)HLE)SSY) | 0.13 | 0.11 | 0.06 | 0.05 |
(((NLE,HLE)SSY)(HPI,HMO)) | 0.06 | 0.05 | 0.10 | 0.08 |
((((HPI,HMO)SSY)NLE)HLE) | 0.07 | 0.06 | 0.08 | 0.07 |
((((HPI,HMO)SSY)HLE)NLE) | 0.05 | 0.07 | 0.07 | 0.14 |
(((HPI,HMO)NLE)(SSY,HLE)) | 0.05 | 0.04 | 0.05 | 0.03 |
(((NLE,SSY)HLE)(HPI,HMO)) | 0.03 | 0.03 | 0.06 | 0.04 |
(((NLE,HLE)(HPI,HMO))SSY) | 0.04 | 0.03 | 0.04 | 0.04 |
(((NLE,SSY)(HPI,HMO))HLE) | 0.03 | 0.03 | 0.03 | 0.02 |
((((HPI,HMO)HLE)SSY)NLE) | 0.02 | 0.04 | 0.03 | 0.06 |
((((HPI,HMO)HLE)NLE)SSY) | 0.02 | 0.02 | 0.02 | 0.02 |
(((HPI,HMO)SSY)(NLE,HLE)) | 0.01 | 0.01 | 0.03 | 0.02 |
(((HPI,HMO)HLE)(NLE,SSY)) | 0.01 | 0.01 | 0.01 | 0.00 |
Boldface type indicates the topology identified using sequence divergence in Carbone et al. (2014).