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. Author manuscript; available in PMC: 2015 May 7.
Published in final edited form as: J Comput Chem. 2008 Mar;29(4):622–655. doi: 10.1002/jcc.20820

Table 3.

Influence of Charge Protocol on Conformational Relative Energies (Erel) Computed with GLYCAM06 for the α- and β-Anomers of D-GlcpOMe and D-GalpOMe.

Erel
Charge protocol
Glycoside conformation (D-GlcpOMe) (HF/6-31G*//HF/6-31G*)a EA-RESPb
<overall>
EA-RESPc
<α, β>
EA-RESPd
<α>, <β>
α1 graphic file with name nihms632952t1.jpg 0.00e 0.00e 0.00e 4.45e
α2 graphic file with name nihms632952t2.jpg 0.11 0.69 0.58 4.97
α3 graphic file with name nihms632952t3.jpg 0.00 0.22 0.26 4.56
β1 graphic file with name nihms632952t4.jpg 1.30 1.12 1.29 0.00
β2 graphic file with name nihms632952t5.jpg 1.23 1.67 1.75 0.5z
β3 graphic file with name nihms632952t6.jpg 1.46 1.24 1.44 0.29
α1 graphic file with name nihms632952t7.jpg 1.62 1.76 1.89 13.65
α2 graphic file with name nihms632952t8.jpg 1.18 0.94 0.82 12.86
α3 graphic file with name nihms632952t9.jpg 0.00 0.00 0.00 11.71
β1 graphic file with name nihms632952t10.jpg 3.24 3.18 3.42 1.93
β2 graphic file with name nihms632952t11.jpg 2.90 2.99 2.65 0.77
β3 graphic file with name nihms632952t12.jpg 1.88 1.79 1.58 0.00
a

Relative energies taken from Ref. 61. Dotted lines indicate hydrogen bonds.

b

Charges computed by averaging the EA charges of: the α- and β-anomers of all glycosides.

c

Charges computed by averaging the EA charges of: the α- and β-anomers of each glycoside.

d

Charges computed by averaging the EA charges of: each anomer on each glycan.

e

Relative to the lowest energy conformation for each glycoside. Units are kcal/mol.