Table 2. B. oleae mitochondrial DNA segments analysed in this study.
Segment | Use | Primers (5’- 3’) | Sequence read (maximum common region) | ||
---|---|---|---|---|---|
Forward | Reverse | mtDNA coordinates* | Genes (% bp) | ||
Segment 01 | All analyses | CTAAGGAAATCACCCTATTTC | TTTGATTAACTTAAAGCCTTGCGTCAATAATGATATTAGACTGC | 522–1189 | ND2 (65.3) |
Segment 03 | All analyses | ATTCCCCAGCAATATTATGAGAATATGGCAGATTAGTGCAATG | CAATACTTGCTTTCAGTCATCGAGATTTCGGTTTGTATATGAG | 2512–3670 | COX1 (29.3), tRNA-Leu and COX2 (92.5) |
Segment 05 | P sublineagediscrimination | CCATTTTAACAGTATACCAATG | TATAAATAGAAGTATAAATGGAG | 4917–5550 | COX3 (80.45) and tRNA-Gly (87.7) |
Segment 08b | P sublineagediscrimination | TCCTCAGTAAGTTAAAGTTATCAACCGTTCATAAGTAATATTCG | GAATTGTATGATTTCAAGAGG | 9268–9858 | ND4 (17.1), ND4L, tRNA-Thr and tRNA-Pro (7.6) |
*Numbering according to the B. olea reference mitochondrial genome (Genbank accession AY210702).