TABLE 1.
R1 variantsa | Protein yieldb | RAG2 bindingc | |
---|---|---|---|
1 | 384–1008 | ++ | ++ |
2 | 528–777 | + | − |
3 | 528–1008 | ++ | − |
4 | 761–980 | +++ | − |
5 | 761–1008 | − | NDd |
6 | Δ721–760 | +++ | ++ |
7 | Δ464–512 | + | − |
8 | 499–508Ae | − | ND |
9 | 477–493Ae | − | ND |
10 | Δ512–528 | − | ND |
11 | 384–555∼983–1008 | − | ND |
12 | 464–555∼983–1008 | − | ND |
13 | 384–518∼960–1008 | + | − |
14 | 383–732∼960–1008 | ++ | ++ |
15 | 384–585∼960–1008 | − | ND |
16 | 464–732∼960–1008 | ++++ | ++ |
17 | 384–732 | + | − |
18 | 528–732∼960–1008 | +++ | − |
19 | 479–732∼960–1008 | ++++ | ++ |
20 | 508–732∼960–1008 | +++ | + |
21 | 508–732∼960–997 | +++ | − |
a All variants were N-terminal MBP- and C-terminal His6-tagged.
b Protein yield and quality were evaluated by FPLC. ++, expression typical for MBP-R1c; ++++, expression typical for MBP-Mini-RAG1, which is ∼5-fold greater than that of MBP-R1c; +, expression reduced at least 2-fold from MBP-R1c.
c Ability to bind to GST-RAG2 core was tested by BLItz and GST pulldown. ++, binding as seen between R2c and either R1c or Mini-RAG1; +, binding reduced 3–20 fold; −, little or no binding detected.
d ND means not done.
e The indicated residues were substituted by alanine.