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. Author manuscript; available in PMC: 2015 May 8.
Published in final edited form as: Mol Phylogenet Evol. 2012 Aug 21;65(3):871–882. doi: 10.1016/j.ympev.2012.08.008

Figure 6.

Figure 6

Bayesian phylogeny of Primates (human, chimpanzee, orangutan, macaque), Laurasiatheria (canine, horse, bovine) and Rodentia (mouse, rat) inferred from concatenated amino acid sequences, assuming (A) gamma-distributed rate variation across sites (rates=gamma) and rate variation across tree (covarion=yes); (B) a proportion of invariable sites combined with the gamma model (rates=invgamma) and rate variation across tree (covarion=yes); (C) gamma-distributed rate variation across sites (rates=gamma, covarion=no); (D) a proportion of invariable sites combined with the gamma model (rates=invgamma, covarion=no).