Table 1. Meaning and results on synthetic phenotypic variables.
Breed | Test | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Trait | Variable | Variable code | LAG | NDA | BAO | BOR | ZFU | ks_test | Wilcox | ||
PCV | Pre-infection median | PCV_Init | 35.86 | 34.38 | 33.80 | 32.50 | 37.38 | 0.083 | 0.793 | ||
(%) | 2.79 | 0.74 | 3.63 | 3.16 | 3.07 | ||||||
Median | PCV_Med | 30.36 | 28.63 | 27.60 | 26.13 | 25.50 | 0.002 | * | 0.001 | ** | |
1.25 | 1.41 | 2.07 | 2.85 | 2.27 | |||||||
Minimum | PCV_Min | 24.86 | 23.88 | 22.60 | 21.75 | 19.38 | 0.004 | * | 0.001 | ** | |
1.46 | 1.73 | 2.30 | 3.28 | 2.45 | |||||||
Maximum decrease | PCV_MD | -11.00 | -10.50 | -11.20 | -10.75 | -18.00 | 0.010 | * | 0.003 | * | |
2.31 | 2.00 | 4.32 | 2.60 | 4.63 | |||||||
Slope decrease | PCV_SD | -0.13 | -0.21 | -0.18 | -0.19 | -0.32 | 0.003 | * | 0.001 | ** | |
0.02 | 0.07 | 0.07 | 0.07 | 0.11 | |||||||
Final value | PCV_FI | 31.86 | 31.00 | 30.20 | 29.13 | 24.88 | 0.048 | 0.007 | * | ||
2.67 | 2.07 | 3.27 | 3.23 | 5.99 | |||||||
Final—init | PCV_FI-Init | -4.00 | -3.38 | -3.60 | -3.38 | -12.50 | 0.033 | 0.016 | * | ||
4.55 | 2.07 | 2.70 | 3.07 | 7.48 | |||||||
PA | Mean [log10(PA+1)] | PA_Mean | 1.88 | 2.01 | 2.17 | 1.67 | 2.16 | 0.425 | 0.060 | ||
(/ml) | 0.22 | 0.46 | 0.48 | 0.94 | 0.88 | ||||||
Rate of positive observation | PA_Obs | 0.51 | 0.53 | 0.60 | 0.44 | 0.55 | 0.342 | 0.059 | |||
0.06 | 0.11 | 0.11 | 0.24 | 0.21 | |||||||
Frist day of positive sample | PA_First | 16.00 | 15.75 | 15.60 | 15.38 | 17.13 | 0.744 | 0.362 | |||
2.08 | 3.96 | 3.05 | 2.50 | 2.64 | |||||||
Maximum value [log10(PA+1)] | PA_Max | 5.09 | 5.14 | 4.96 | 4.73 | 5.26 | 0.750 | 0.202 | |||
0.48 | 0.58 | 0.53 | 0.92 | 0.83 | |||||||
Hb | Pre-infection median | Hb_Init | 12.45 | 11.51 | 11.47 | 11.11 | 12.78 | 0.021 | 0.757 | ||
(g/dl) | 0.94 | 0.36 | 0.94 | 0.93 | 1.16 | ||||||
Median | Hb_Med | 10.05 | 9.37 | 9.08 | 8.51 | 8.33 | 0.001 | ** | 0.001 | ** | |
0.48 | 0.43 | 0.47 | 0.83 | 0.80 | |||||||
Minimum | Hb_Min | 8.03 | 7.61 | 6.88 | 7.03 | 6.33 | 0.035 | 0.004 | * | ||
0.92 | 0.85 | 1.03 | 1.33 | 1.08 | |||||||
Maximum decrease | Hb_MD | -4.42 | -3.89 | -4.59 | -4.08 | -6.45 | 0.002 | * | 0.002 | * | |
1.07 | 0.96 | 0.67 | 1.08 | 0.95 | |||||||
Slope decrease | Hb_SD | -0.08 | -0.06 | -0.07 | -0.10 | -0.11 | 0.038 | 0.060 | |||
0.03 | 0.02 | 0.03 | 0.06 | 0.03 | |||||||
Final value | Hb_FI | 10.31 | 9.85 | 9.64 | 9.49 | 7.75 | 0.021 | 0.005 | * | ||
0.51 | 0.62 | 1.00 | 0.96 | 1.79 | |||||||
Final—init | Hb_FI-Init | -2.14 | -1.66 | -1.83 | -1.63 | -5.03 | 0.001 | ** | 0.002 | * | |
0.77 | 0.49 | 0.67 | 0.78 | 1.86 | |||||||
RBC | Pre-infection median | RBC_Init | 8.56 | 8.17 | 8.28 | 7.67 | 9.30 | 0.004 | * | 0.964 | |
(x109/ml) | 0.83 | 0.37 | 0.58 | 0.82 | 0.61 | ||||||
Median | RBC_Med | 7.16 | 6.81 | 6.69 | 5.82 | 6.36 | 0.010 | * | 0.020 | ||
0.55 | 0.79 | 0.38 | 0.73 | 0.60 | |||||||
Minimum | RBC_Min | 5.82 | 5.37 | 4.98 | 4.53 | 4.38 | 0.043 | 0.014 | |||
0.76 | 0.87 | 0.50 | 0.99 | 1.20 | |||||||
Maximum decrease | RBC_MD | -2.74 | -2.80 | -3.30 | -3.13 | -4.93 | 0.002 | * | 0.000 | ** | |
0.92 | 0.77 | 0.69 | 0.77 | 1.00 | |||||||
Slope decrease | RBC_SD | -0.05 | -0.05 | -0.04 | -0.05 | -0.09 | 0.046 | 0.014 | |||
0.02 | 0.02 | 0.02 | 0.01 | 0.04 | |||||||
Final value | RBC_FI | 8.01 | 7.34 | 7.30 | 6.40 | 5.44 | 0.018 | 0.007 | * | ||
1.17 | 1.25 | 0.52 | 0.97 | 1.53 | |||||||
Final—init | RBC_FI-Init | -0.55 | -0.83 | -0.98 | -1.26 | -3.86 | 0.001 | ** | 0.000 | ** | |
1.41 | 1.07 | 0.81 | 0.87 | 1.48 | |||||||
TWBC | Pre-infection median | TWBC_Init | 6.43 | 6.26 | 7.42 | 6.70 | 6.70 | 0.167 | 0.699 | ||
(x106/ml) | 0.88 | 0.39 | 0.93 | 0.79 | 0.91 | ||||||
Median | TWBC_Med | 13.81 | 12.31 | 11.70 | 9.96 | 8.99 | 0.001 | ** | 0.000 | ** | |
2.00 | 2.23 | 1.33 | 2.06 | 1.64 | |||||||
Maximum | TWBC_Max | 18.27 | 17.80 | 16.82 | 15.09 | 13.23 | 0.009 | * | 0.003 | * | |
2.78 | 2.99 | 2.42 | 2.45 | 2.32 | |||||||
Maximum increase | TWBC_MI | 11.84 | 11.54 | 9.40 | 8.39 | 6.53 | 0.010 | * | 0.002 | * | |
2.03 | 3.11 | 3.12 | 2.84 | 2.83 | |||||||
Slope increase | TWBC_SI | 0.14 | 0.12 | 0.09 | 0.11 | 0.09 | 0.143 | 0.036 | |||
0.06 | 0.03 | 0.02 | 0.06 | 0.04 | |||||||
Final value | TWBC_FI | 16.96 | 15.21 | 15.02 | 13.26 | 10.63 | 0.020 | 0.000 | ** | ||
3.02 | 3.71 | 2.51 | 2.97 | 3.34 | |||||||
Final—init | TWBC_FI-Init | 10.53 | 8.95 | 7.60 | 6.56 | 3.93 | 0.025 | 0.000 | ** | ||
2.27 | 3.76 | 3.27 | 3.22 | 3.67 |
For each breed, the average for the individuals is noted, with its standard deviation below. P-values for the non-parametric Kruskal-Wallis tests (ks_test) on the 5 breeds and for the Wilcoxon tests (wilcox) comparing LAG and ZFU (LAG>ZFU hypothesis except PA) are shown.
Symbols:
“*” P-values ≤ 0.01
“**”P-values ≤ 0.001