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. 2015 Mar 20;16(1):218. doi: 10.1186/s12864-015-1368-9

Table 7.

Virtual analyses of LSP and Beijing typing

Species Strain name LSP lineage Beijing typing
Beijing Modern/Ancestral
M. tuberculosis CCDC5079 2 No -
CCDC5180 2 Yes Modern
CDC1551 4 No -
CTRI-2 4 No -
Erdman 4 No -
F11 4 No -
H37Ra 4 No -
H37Rv 4 No -
KZN605 4 No -
KZN1435 4 No -
KZN4207 4 No -
RGTB327 4 No -
RGTB423 4 No -
M. bovis BCG Mexico 4 No -
Moreau RDJ 4 No -
Pasteur 4 No -
Tokyo 172 4 No -
M. africanum GMO41182 6 No -
M. canettii CIPT 140010059 2 No -

LSP analysis [8] and Beijing typing [55] of target sequences were performed in silico using the indicated primers in the articles.