Table 2.3.
Full list of GO Terms Enriched Among Genes With Significantly Increased Expression Through Time
| GOID | GO Name | # Genes in GO |
%Genes Changed |
%Genes Present |
Z- Score |
Parametric p-value |
|---|---|---|---|---|---|---|
| 48232 | male gamete generation | 194 | 53.3 | 70.6 | 11.94 | 4.0E-05 |
| 7283 | Spermatogenesis | 194 | 53.3 | 70.6 | 11.94 | 4.0E-05 |
| 19953 | sexual reproduction | 327 | 45 | 67.9 | 11.87 | 4.6E-05 |
| 3 | Reproduction | 492 | 35.5 | 65.2 | 9.62 | 5.2E-05 |
| 7276 | gamete generation | 278 | 41.8 | 66.2 | 9.60 | 5.1E-05 |
| 9566 | Fertilization | 48 | 62.9 | 72.9 | 7.55 | 2.0E-05 |
| 7338 | single fertilization | 48 | 61.8 | 70.8 | 7.27 | 2.1E-05 |
| 30317 | sperm motility | 15 | 75 | 106.7 | 6.43 | 3.7E-05 |
| 48515 | spermatid differentiation | 36 | 56.2 | 88.9 | 6.20 | 7.7E-05 |
| 7286 | spermatid development | 34 | 56.7 | 88.2 | 6.07 | 3.3E-05 |
| 7127 | meiosis I | 32 | 63.2 | 59.4 | 5.60 | 1.9E-04 |
| 6457 | protein folding | 238 | 29.5 | 72.7 | 4.84 | 1.2E-04 |
| 6512 | ubiquitin cycle | 433 | 25.3 | 83.1 | 4.84 | 7.7E-05 |
| 35036 | sperm-egg recognition | 12 | 66.7 | 100 | 4.78 | 1.5E-07 |
| 1539 | ciliary or flagellar motility | 6 | 100 | 66.7 | 4.57 | 1.7E-06 |
| 7129 | Synapsis | 9 | 75 | 88.9 | 4.54 | 2.2E-04 |
| 9988 | cell-cell recognition | 13 | 61.5 | 100 | 4.47 | 1.5E-07 |
| 51327 | M phase of meiotic cell cycle | 76 | 37.7 | 69.7 | 4.31 | 1.5E-04 |
| 7126 | Meiosis | 76 | 37.7 | 69.7 | 4.31 | 1.5E-04 |
| 7339 | binding of sperm to zona pellucida | 11 | 63.6 | 100 | 4.30 | 1.6E-07 |
| 51321 | meiotic cell cycle | 77 | 37 | 70.1 | 4.21 | 1.5E-04 |
| 48240 | sperm capacitation | 5 | 100 | 60 | 3.96 | 3.3E-05 |
| 6644 | phospholipid metabolic process | 127 | 30.1 | 81.1 | 3.90 | 9.7E-05 |
| 2483 | antigen processing and presentation of endogenous peptide antigen | 8 | 80 | 62.5 | 3.90 | 4.8E-05 |
| 19885 | antigen processing and presentation of endogenous peptide antigen via MHC class I | 8 | 80 | 62.5 | 3.90 | 4.8E-05 |
| 30163 | protein catabolic process | 220 | 27.2 | 71.8 | 3.85 | 9.4E-05 |
| 6643 | membrane lipid metabolic process | 173 | 28 | 76.3 | 3.77 | 9.0E-05 |
| 6511 | ubiquitin-dependent protein catabolic process | 165 | 28.9 | 69.1 | 3.77 | 6.9E-05 |
| 19941 | modification-dependent protein catabolic process | 167 | 28.4 | 69.5 | 3.65 | 6.9E-05 |
| 43632 | modification-dependent macromolecule catabolic process | 167 | 28.4 | 69.5 | 3.65 | 6.9E-05 |
| 8654 | phospholipid biosynthetic process | 67 | 33.9 | 83.6 | 3.65 | 3.7E-05 |
| 6352 | transcription initiation | 45 | 37.8 | 82.2 | 3.62 | 5.1E-05 |
| 44265 | cellular macromolecule catabolic process | 319 | 25.1 | 64.9 | 3.58 | 5.9E-05 |
| 6516 | glycoprotein catabolic process | 16 | 62.5 | 50 | 3.58 | 1.4E-04 |
| 6913 | nucleocytoplasmic transport | 127 | 29.7 | 71.7 | 3.55 | 1.2E-04 |
| 51603 | proteolysis involved in cellular protein catabolic process | 170 | 28 | 69.4 | 3.54 | 6.9E-05 |
| 6464 | protein modification process | 1609 | 19.5 | 78.3 | 3.54 | 8.7E-05 |
| 6508 | proteolysis | 806 | 21.3 | 70.5 | 3.49 | 8.2E-05 |
| 6611 | protein export from nucleus | 16 | 50 | 87.5 | 3.46 | 1.3E-04 |
| 9057 | macromolecule catabolic process | 387 | 23.8 | 67.2 | 3.46 | 7.8E-05 |
| 22414 | reproductive process | 248 | 26.1 | 63.3 | 3.46 | 5.4E-05 |
| 44257 | cellular protein catabolic process | 172 | 27.5 | 69.8 | 3.43 | 6.9E-05 |
| 46467 | membrane lipid biosynthetic process | 85 | 31.3 | 78.8 | 3.42 | 3.4E-05 |
| 65004 | protein-DNA complex assembly | 172 | 29.2 | 51.7 | 3.39 | 5.0E-05 |
| 7342 | fusion of sperm to egg plasma membrane | 9 | 66.7 | 66.7 | 3.38 | 8.0E-07 |
| 51169 | nuclear transport | 115 | 29.6 | 70.4 | 3.34 | 1.3E-04 |
| 43412 | biopolymer modification | 1677 | 19.2 | 78.1 | 3.31 | 8.6E-05 |
| 7017 | microtubule-based process | 216 | 25.6 | 72.2 | 3.28 | 9.2E-05 |
| 44267 | cellular protein metabolic process | 3258 | 18.2 | 74 | 3.26 | 9.3E-05 |
| 45862 | positive regulation of proteolysis | 5 | 75 | 80 | 3.21 | 3.1E-05 |
| 7131 | meiotic recombination | 17 | 75 | 23.5 | 3.21 | 6.4E-06 |
| 6003 | fructose 2\,6-bisphosphate metabolic process | 4 | 75 | 100 | 3.21 | 2.5E-04 |
| 9894 | regulation of catabolic process | 19 | 50 | 63.2 | 3.21 | 2.1E-05 |
| 44260 | cellular macromolecule metabolic process | 3301 | 18.1 | 74.1 | 3.14 | 9.3E-05 |
| 19538 | protein metabolic process | 3404 | 18.1 | 74 | 3.12 | 9.2E-05 |
| 6986 | response to unfolded protein | 62 | 38.5 | 41.9 | 3.12 | 3.9E-05 |
| 51789 | response to protein stimulus | 62 | 38.5 | 41.9 | 3.12 | 3.9E-05 |
| 19318 | hexose metabolic process | 174 | 26.5 | 67.2 | 3.09 | 7.0E-05 |
| 22403 | cell cycle phase | 289 | 23.5 | 78.2 | 3.06 | 1.2E-04 |
| 9056 | catabolic process | 639 | 21 | 72.1 | 2.97 | 7.2E-05 |
| 279 | M phase | 232 | 23.9 | 81 | 2.97 | 1.3E-04 |
| 7340 | acrosome reaction | 12 | 57.1 | 58.3 | 2.96 | 4.5E-07 |
| 45026 | plasma membrane fusion | 10 | 57.1 | 70 | 2.96 | 8.0E-07 |
| 19883 | antigen processing and presentation of endogenous antigen | 11 | 57.1 | 63.6 | 2.96 | 4.8E-05 |
| 5996 | monosaccharide metabolic process | 178 | 25.8 | 67.4 | 2.93 | 7.0E-05 |
| 42176 | regulation of protein catabolic process | 14 | 50 | 71.4 | 2.93 | 2.5E-05 |
| 6515 | misfolded or incompletely synthesized protein catabolic process | 19 | 50 | 52.6 | 2.93 | 1.9E-04 |
| 30433 | ER-associated protein catabolic process | 18 | 50 | 55.6 | 2.93 | 1.9E-04 |
| 6493 | protein amino acid O-linked glycosylation | 16 | 50 | 62.5 | 2.93 | 1.7E-04 |
| 6367 | transcription initiation from RNA polymerase II promoter | 25 | 40 | 80 | 2.92 | 7.1E-05 |
| 43687 | post-translational protein modification | 1375 | 19.1 | 79.1 | 2.90 | 8.5E-05 |
| 51170 | nuclear import | 80 | 29.5 | 76.2 | 2.87 | 1.2E-04 |
| 43285 | biopolymer catabolic process | 285 | 23.2 | 71.2 | 2.78 | 9.5E-05 |
| 30503 | regulation of cell redox homeostasis | 7 | 60 | 71.4 | 2.68 | 1.8E-05 |
| 7128 | meiotic prophase I | 4 | 60 | 125 | 2.68 | 1.0E-07 |
| 7130 | synaptonemal complex assembly | 6 | 60 | 83.3 | 2.68 | 1.1E-04 |
| 51324 | prophase | 4 | 60 | 125 | 2.68 | 1.0E-07 |
| 6000 | fructose metabolic process | 13 | 60 | 38.5 | 2.68 | 2.5E-04 |
| 6072 | glycerol-3-phosphate metabolic process | 7 | 60 | 71.4 | 2.68 | 4.7E-05 |
| 42787 | protein ubiquitination during ubiquitin-dependent protein catabolic process | 5 | 60 | 100 | 2.68 | 1.2E-04 |
| 9191 | ribonucleoside diphosphate catabolic process | 5 | 60 | 100 | 2.68 | 1.2E-05 |
| 46470 | phosphatidylcholine metabolic process | 7 | 60 | 71.4 | 2.68 | 3.4E-04 |
| 31365 | N-terminal protein amino acid modification | 6 | 60 | 83.3 | 2.68 | 3.6E-04 |
| 6606 | protein import into nucleus | 79 | 28.8 | 74.7 | 2.68 | 1.2E-04 |
| 7001 | chromosome organization and biogenesis (sensu Eukaryota) | 390 | 22.1 | 64.9 | 2.66 | 1.1E-04 |
| 45582 | positive regulation of T cell differentiation | 11 | 45.5 | 100 | 2.66 | 1.4E-04 |
| 51168 | nuclear export | 40 | 34.6 | 65 | 2.58 | 2.1E-04 |
| 6096 | glycolysis | 76 | 30.2 | 56.6 | 2.54 | 1.8E-05 |
| 6006 | glucose metabolic process | 133 | 25.8 | 66.9 | 2.53 | 4.8E-05 |
| 51276 | chromosome organization and biogenesis | 399 | 21.5 | 66.4 | 2.45 | 1.1E-04 |
| 7018 | microtubule-based movement | 115 | 26.3 | 66.1 | 2.45 | 6.6E-05 |
| 18342 | protein prenylation | 17 | 41.7 | 70.6 | 2.42 | 1.2E-04 |
| 16311 | dephosphorylation | 146 | 24 | 82.9 | 2.38 | 1.4E-04 |
| 48002 | antigen processing and presentation of peptide antigen | 37 | 30.6 | 97.3 | 2.37 | 1.1E-04 |
| 46164 | alcohol catabolic process | 93 | 27.8 | 58.1 | 2.35 | 2.7E-05 |
| 8037 | cell recognition | 41 | 31.2 | 78 | 2.35 | 3.8E-07 |
| 6944 | membrane fusion | 31 | 37.5 | 51.6 | 2.34 | 8.7E-05 |
| 18346 | protein amino acid prenylation | 13 | 44.4 | 69.2 | 2.32 | 1.5E-04 |
| 46165 | alcohol biosynthetic process | 27 | 35 | 74.1 | 2.31 | 7.4E-05 |
| 46364 | monosaccharide biosynthetic process | 27 | 35 | 74.1 | 2.31 | 7.4E-05 |
| 19319 | hexose biosynthetic process | 27 | 35 | 74.1 | 2.31 | 7.4E-05 |
| 6066 | alcohol metabolic process | 300 | 21.6 | 72.7 | 2.23 | 7.1E-05 |
| 7049 | cell cycle | 762 | 19.4 | 74.4 | 2.22 | 1.1E-04 |
| 6007 | glucose catabolic process | 86 | 27.5 | 59.3 | 2.22 | 2.5E-05 |
| 51252 | regulation of RNA metabolic process | 17 | 38.5 | 76.5 | 2.20 | 3.5E-04 |
| 44248 | cellular catabolic process | 510 | 20.2 | 69.8 | 2.18 | 6.4E-05 |
| 32446 | protein modification by small protein conjugation | 75 | 26.2 | 81.3 | 2.17 | 6.3E-05 |
| 6338 | chromatin remodeling | 52 | 28.9 | 73.1 | 2.17 | 8.6E-05 |
| 46365 | monosaccharide catabolic process | 91 | 26.9 | 57.1 | 2.14 | 2.5E-05 |
| 19320 | hexose catabolic process | 91 | 26.9 | 57.1 | 2.14 | 2.5E-05 |
| 46916 | transition metal ion homeostasis | 49 | 30 | 61.2 | 2.08 | 6.1E-05 |
| 31497 | chromatin assembly | 142 | 25.4 | 44.4 | 2.03 | 3.6E-05 |
| 6333 | chromatin assembly or disassembly | 180 | 23.6 | 49.4 | 1.95 | 7.0E-05 |