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Search strategy for plastid-encoded genes and nucleus-encoded genes for plastid-targeted (or mitochondrial-targeted) proteins. Gene query sets were from predicted apicoplast-targeted proteins common to Plasmodium (A); predicted P. falciparum mitochondrion-targeted proteins (B); and plastid-encoded genes common to apicomplexans, dinoflagellates, and chromerids (C). A list of genes and full search results are shown in Datasets S1–S3. FL, full length; mTP, mitochondrial targeting peptide.
