Skip to main content
. 2015 Apr 25;71(Pt 5):1147–1158. doi: 10.1107/S1399004715004241

Table 2. Benchmark of the abilities of classifiers to distinguish different ions from one another in the blind, curated test set.

Shown here are the unmodified decision-tree algorithm as well as SVMs trained on the curated training set using all features of a site and the same SVM with a simple filter applied to the predictions. The pairs of numbers for each SVM and ion pair indicate the number of correct identifications of the first and second ion, respectively.

    Total sites Decision tree All features All features (filtered predictions)
Ion 1 Ion 2 Ion 1 Ion 2 Ion 1 Ion 2 Ion 1 Ion 2 Ion 1 Ion 2
Ca2+ Mn2+ 108 70 60, 0 31, 2 86, 9 59, 8 84, 5 61, 10
Ca2+ Fe2+/3+ 108 17 60, 0 9, 0 92, 0 17, 0 90, 0 14, 1
Ca2+ Ni2+ 108 49 60, 0 32, 0 91, 0 48, 1 90, 0 38, 2
Ca2+ Zn2+ 108 64 60, 0 47, 0 92, 0 60, 0 90, 0 52, 1
Mn2+ Fe2+/3+ 70 17 11, 1 6, 0 51, 2 15, 17 50, 2 12, 16
Mn2+ Ni2+ 70 49 22, 0 28, 0 52, 2 46, 16 51, 7 36, 15
Mn2+ Zn2+ 70 64 26, 0 33, 0 46, 3 57, 22 45, 5 50, 21
Fe2+/3+ Ni2+ 17 49 2, 0 27, 0 11, 5 43, 6 8, 9 33, 6
Fe2+/3+ Zn2+ 17 64 2, 0 35, 1 11, 2 58, 6 9, 3 50, 5
Ni2+ Zn2+ 49 64 1, 0 24, 0 18, 5 55, 30 17, 3 49, 21
Total true positives 569 1008 929
Total false positives 4 134 132