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. Author manuscript; available in PMC: 2015 May 12.
Published in final edited form as: Hum Pathol. 2013 Nov 12;45(4):701–708. doi: 10.1016/j.humpath.2013.11.001

Appendix 1.

GENES AND MUTATIONS INVESTIGATED

AKT1_E17K_G49A FGFR1_S125L_C374T MET_Y1248C_A3743G
AKT2_E17K_G49A FGFR2_N549KK_T1647GA MET_Y1248HD_T3742CG
AKT3_E17K_G49A FGFR2_S252W_C755G MET_Y1253D_T3757G
ALK_F1174CS_T3521GC FGFR3_G370C_G1108T MGA_T1747N_C5421A
ALK_F1174L_C3522AG FGFR3_G380R_G1138A NRAS_A146T_G436A
ALK_F1174LIV_T3520CAG FGFR3_G697C_G2089T NRAS_G12DAV_G35ACT
ALK_F1245C_T3734G FGFR3_K650MT_A1949TC NRAS_G12SRC_G34ACT
ALK_F1245L_C3735AG FGFR3_R248C_C742T NRAS_G13DAV_G38ACT
ALK_F1245VI_T3733GA FGFR3_S249C_C746G NRAS_G13SRC_G37ACT
ALK_I1171N_T3512A FGFR3_Y373C_A1118G NRAS_Q61EKX_C181GAT
ALK_R1275QL_G3824AT FOXL2_C134W_C402G NRAS_Q61HHQ_A183TCG
BCOR_N1407STI_A4220GCT GNA11_Q209LP_A626TC NRAS_Q61RPL_A182GCT
BRAF_D594GV_A1781GT GNA11_R183C_C547T PDGFRA_D842V_A2525T
BRAF_E586K_G1756A GNAQ_Q209H_A627T PDGFRA_D842YN_G2524TA
BRAF_G464EVA_G1391ATC GNAQ_Q209LPR_A626TCG PDGFRA_N659K_C1977A
BRAF_G466EVA_G1397ATC GNAS_R201H_G602A PDGFRA_N659Y_A1975T
BRAF_G466R_G1396CA GNAS_R201SC_C601AT PDGFRA_V561D_T1682A
BRAF_G469EVA_G1406ATC GRM3_E870K_G2608A PIK3CA_A1046V_C3137T
BRAF_G469R_G1405CA IDH1_G70D_G209A PIK3CA_C420R_T1258C
BRAF_K601E_A1801G IDH1_R132CGS_C394TGA PIK3CA_E110K_G328A
BRAF_L597RQ_T1790GA IDH1_R132HL_G395AT PIK3CA_E418K_G1252A
BRAF_V600_G1800 IDH1_V178I_G532A PIK3CA_E453K_G1357A
BRAF_V600EAG_T1799ACG_F IDH2_R140LQ_G419TA PIK3CA_E542KQ_G1624AC
BRAF_V600EAG_T1799ACG_R IDH2_R140W_C418T PIK3CA_E542VG_A1625TG
BRAF_V600LM_G1798TA IDH2_R172GW_A514GT PIK3CA_E545AGV_A1634CGT
CC2D1A_L913V_C3036G IDH2_R172MK_G515TA PIK3CA_E545D_G1635CT
CDK4_R24C_C70T IDH2_R172S_G516T PIK3CA_E545KQ_G1633AC
CDK4_R24H_G71A JAK2_V617F_G1849T PIK3CA_F909L_C2727G
CSMD1_A409S_G1225T KIT_D816GVA_A2447GTC PIK3CA_G118D_G353A
CSMD1_Q3005X_C9013T KIT_D816HNY_G2446CAT PIK3CA_H1047RL_A3140GT_F
CTNNB1_D32AGV_A95CGT KIT_K642E_A1924G PIK3CA_H1047RL_A3140GT_R
CTNNB1_D32HNY_G94CAT KIT_L576P_T1727C PIK3CA_H1047Y_C3139T
CTNNB1_G34EVA_G101ATC KIT_N566D_A1696G PIK3CA_H701P_A2102C
CTNNB1_H36PRY_A107CGT KIT_N822KNK_T2466GCA PIK3CA_K111N_G333C
CTNNB1_I35NST_T104AGC KIT_N822YHD_A2464TCG PIK3CA_M1043I_G3129ATC
CTNNB1_S33APT_T97GCA KIT_R634W_C1900T PIK3CA_M1043V_A3127G
CTNNB1_S37CFY_C110GTA KIT_V559ADG_T1676CAG PIK3CA_N345K_T1035A
CTNNB1_S45APT_T133GCA KIT_V560DGA_T1679AGC PIK3CA_P539R_C1616G
CTNNB1_S45CFY_C134GTA KIT_V825A_T2474C PIK3CA_Q060K_C178A
CTNNB1_T41APS_A121GCT KIT_Y553N_T1657A PIK3CA_Q546EK_C1636GA
CTNNB1_T41INS_C122TAG KRAS_A146PT_G436CA PIK3CA_Q546LPR_A1637TCG
EGFR_G719CS_G2155TA KRAS_G10R_G28A PIK3CA_R088Q_G263A
EGFR_K860I_A2579T KRAS_G12DAV_G35ACT PIK3CA_S405F_C1214T
EGFR_L858R_T2573G KRAS_G12SRC_G34ACT PIK3CA_T1025SA_A3073TG
EGFR_L861QR_T2582AG KRAS_G13DAV_G38ACT PIK3CA_Y1021C_A3062G
EGFR_S720P_T2158C KRAS_G13SRC_G37ACT PIK3CA_Y1021HN_T3061CA
EGFR_T790M_C2369T KRAS_Q61EKX_C181GAT PPP2R1A_W257G_T769G
EGFR_T854I_C2561T KRAS_Q61HHQ_A183CTG RAF1_A319S_G955T
EGFR_Y813C_A2438G KRAS_Q61LPR_A182TCG RAF1_L613V_C1837G
EPHA3_K761NN_G2283TC MAP2K2_E207KQ_G619AC RAF1_N115S_A344G
FBXO4_L23Q_T68A MAP2K7_D290D_C870T RAF1_Q335H_G1005C
FBXO4_P76T_C226A MAP2K7_R162H_G485A RAF1_S259A_T775G
FBXO4_S8R_C24AG MAP2K7_S271T_T811A RAF1_Y340D_T1018G
FBXW7_R465C_C1393T MAP2K7_S311L_C932T RET_M918T_T2753C
FBXW7_R465HL_G1394AT MET_H1112RL_A3335GT RPL22_K15TRM_A44CGT
FBXW7_R479QL_G1436AT MET_H1112Y_C3334T SFRS9_Y192X_C722A
FBXW7_R505CS_C1513TA MET_M1268T_T3803C SMO_A324T_G970A
FBXW7_R505HLP_G1514ATC MET_N375S_A1124G SRC_Q531X_C1591T
FBXW7_S582L_C1745T MET_R988C_C2962T TGM2_S212P_T734C
FGFR1_P252T_C754A MET_T1010I_C3029T