Table 4. Gene expression levels of specific targets in Ethiopians and Tanzanians with clinical inflammation (P2/P3) relative to non-inflamed (P0/P1) individuals.
Target | Baseline | 6-months | 12-months | 18-months | ||||
---|---|---|---|---|---|---|---|---|
FC | P-value | FC | P-value | FC | P-value | FC | P-value | |
ETHIOPIA | ||||||||
S100A7 | 2.44 | 0.0001 | 4.69 | <0.0001 | 2.53 | <0.0001 | 1.15 | 0.58 |
IL1B | 1.71 | 0.049 | 7.19 | <0.0001 | 2.49 | 0.0008 | 1.43 | 0.30 |
IL13 | 0.84 | 0.39 | 1.57 | 0.072 | 1.24 | 0.17 | 1.43 | 0.17 |
IL17A | 2.04 | 0.0008 | 3.20 | 0.0001 | 2.05 | 0.0007 | 1.22 | 0.47 |
CXCL5 | 8.92 | <0.0001 | 12.91 | <0.0001 | 4.18 | 0.0001 | 2.17 | 0.11 |
CTGF | 3.10 | 0.0001 | 6.14 | <0.0001 | 2.93 | 0.0002 | 2.15 | 0.08 |
CEACAM5 | 1.76 | 0.0001 | 2.93 | <0.0001 | 1.81 | 0.0002 | 1.32 | 0.14 |
MMP7 | 1.33 | 0.07 | 1.77 | 0.0045 | 1.59 | 0.0027 | 1.33 | 0.16 |
MMP9 | 0.80 | 0.12 | 1.20 | 0.27 | 1.13 | 0.30 | 1.02 | 0.89 |
CD83 | 1.22 | 0.046 | 1.79 | <0.0001 | 1.48 | 0.0002 | 1.29 | 0.06 |
SPARCL1 | 0.50 | 0.0001 | 0.50 | 0.0007 | 0.70 | 0.0172 | 0.56 | 0.030 |
TANZANIA | ||||||||
S100A7 | 1.92 | 0.017 | 1.81 | 0.05 | 1.69 | 0.20 | 6.44 | 0.0071 |
IL1B | 2.28 | 0.022 | 1.60 | 0.26 | 2.40 | 0.08 | 1.36 | 0.64 |
IL13 | 1.02 | 0.95 | 1.03 | 0.95 | 1.26 | 0.64 | 2.35 | 0.29 |
IL17A | 2.93 | <0.0001 | 1.70 | 0.05 | 4.17 | 0.0001 | 2.04 | 0.69 |
CXCL5 | 3.16 | <0.0001 | 2.60 | 0.0053 | 4.01 | 0.0013 | 6.98 | 0.0080 |
CTGF | 1.21 | 0.67 | 2.65 | 0.08 | 2.86 | 0.15 | 14.13 | 0.039 |
CEACAM5 | 2.60 | <0.0001 | 2.64 | 0.0001 | 1.83 | 0.046 | 3.82 | 0.0024 |
MMP7 | 1.55 | 0.0057 | 1.77 | 0.0026 | 1.88 | 0.022 | 2.06 | 0.08 |
MMP9 | 1.07 | 0.70 | 1.30 | 0.22 | 1.05 | 0.86 | 2.20 | 0.09 |
CD83 | 1.25 | 0.047 | 1.44 | 0.0085 | 1.98 | 0.0025 | 1.68 | 0.06 |
SPARCL1 | 1.46 | 0.19 | 0.41 | 0.0005 | 0.68 | 0.45 | 0.48 | 0.16 |
FC fold change; P values for unpaired t test. Using the Benjamini and Hochberg approach only tests with a p-value below 0.030 in the Ethiopian study and a p-value below 0.030 in the Tanzanian study have a False Discovery Rate of <5%.