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. 2015 Apr 9;13:320–328. doi: 10.1016/j.csbj.2015.03.006

Table 1.

Model parameters.

Parameters Remarks
Rate constants
k1 1 × 103 M− 1 s− 1 [21,61]
k2 2 × 105 M− 1 s− 1 [34,59]
k3 1 × 107 M− 1 s− 1 [21]
k4 2 × 104 M− 1 s− 1 [21,28]
k5 103–109 M− 1 s− 1 [20,28]
k6 103–109 M− 1 s− 1 This study
k7 5 × 106 M− 1 s− 1 [20,22]
k8 103− 109 M− 1 s− 1 This study
k− 1 1 × 10− 2 s− 1 [21]
k− 2 2 × 10− 1 s− 1 [59]
k− 3 0 s− 1 [21]
k− 4 2 × 10− 2 s− 1 [21,28]
k− 5 1 × 10− 1 s− 1 [28]
k− 6 1 × 10− 2 s− 1 This study
k− 7 1 × 10− 1 s− 1 [20,22]
k− 8 8 × 10− 2 s− 1 This study



Initial amount
Cdc20 0.22 μM [39,62]
O-Mad2 0.15 μM [59]
Mad1:C-Mad2 0.05 μM [33]
BubR1:Bub3 0.13 μM [20,39,63]
APC 0.09 μM [62]
Other species start from zero



Diffusion constants
Cdc20 19.5 μms− 1 [64]
O-Mad2 5 μms− 1 [28]
Mad1:C-Mad2 0 μms− 1 [28]
Mad1:C-Mad2:Mad2* 0 μms− 1 [28]
Bub3:BubR1 4 μms− 1 [16,65]
APC 1.8 μms− 1 [64]
Other species diffusion coefficients are calculated from DAB=DA*DBDA+DB, where DA and DB are the diffusion coefficient for A and B, respectively. This study



Convection constant
O-Mad2 10 μm s− 1 [28]



Environment
Radius of the kinetochore 0.1 μm [66]
Radius of the cell 10 μm [28]