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. 2015 May 6;5(5):e006920. doi: 10.1136/bmjopen-2014-006920

Table 1.

Top eight SNP associated with postoperative myocardial infarction

        Stage I: discovery data set*
Stage II: expanded data set*
        MAF
MAF
Chr SNP Base pair Gene symbol Controls
N=1321
Cases
N=112
OR (95% CI) p Value Controls
N=1830
Cases
N=225
OR (95% CI) p Value
1 rs10489478 176 566 350 PAPPA2 0.18 0.09 0.41 (0.25 to 0.66) 2.67×10−4 0.18 0.11 0.47 (0.34 to 0.65) 4.70×10−6
1 rs10913237 176 630 416 PAPPA2 0.18 0.09 0.39 (0.24 to 0.64) 1.85×10−4 0.19 0.11 0.46 (0.33 to 0.63) 2.47×10−6
1 rs10454444 176 649 181 PAPPA2 0.18 0.09 0.39 (0.24 to 0.64)1 1.81×10−4 0.19 0.11 0.46 (0.33 to 0.63) 2.43×10−6
2 rs10 200 850 240 234 901 HDAC4 0.06 0.13 2.22 (1.42 to 3.46) 4.34×10−4 0.06 0.11 2.23 (1.57 to 3.17) 8.18×10−6
4 rs4834703 119 691 624 SEC24D 0.09 0.18 2.27 (1.54 to 3.34) 3.13×10−5 0.09 0.16 1.98 (1.47 to 2.66) 6.80×10−6
4 rs6822035 119 710 421 SEC24D 0.29 0.40 1.73 (1.29 to 2.33) 2.59×10−4 0.28 0.36 1.65 (1.32 to 2.05) 9.55×10−6
12 rs2303970 74 471 340 TRHDE|LOC552889 0.48 0.35 0.58 (0.43 to 0.78) 3.51×10−4 0.48 0.36 0.62 (0.50 to 0.76) 8.89×10−6
13 rs609418 37 417 427 RFXAP | SMAD9 0.25 0.35 1.73 (1.28 to 2.33) 3.14×10−4 0.25 0.33 1.67 (1.34 to 2.09) 5.81×10−6

*Adjusted for clinical characteristics including extracardiac arteriopathy, recent myocardial infarction, procedure other than CABG only, year of surgery, number of diseased vessels and aortic cross-clamp time.

HDAC4, histone deacetylase-4; PAPPA2, pregnancy-associated plasma protein A2; RFXAP, regulatory factor X-associated protein; SEC24D, SEC24-related protein D; SMAD9, mother against decapentaplegic homolog 9; TRHDE, thyrotropin-releasing hormone-degrading ectoenzyme; intergenic region is expressed by two franking genes with ‘|’ in between.

CABG, coronary artery bypass grafting; Chr, chromosome; MAF, minor allele frequency (based on the discovery data set); SNP, single nucleotide polymorphisms.