Table 1.
Target genes | Primer used (5′-3′) | Thermal cycling condition | PCR product size |
---|---|---|---|
TEM | TAATCAGTGAGGCACCTATCTC GAGTATTCAACATTTCCGTGTC [18, 19] |
94°C 3 min → 35 × [94°C 30 sec, 45°C 45 sec, 72°C 40 sec] → 72°C 7 min |
800 bp |
| |||
CTX | TTTGCGATGTGCAGTACCAGTAA CGATATCGTTGGTGGCATA [20] |
94°C 5 min → 40 × [94°C 45 sec, 53.1°C 45 sec, 72°C 1 min] → 72°C 7 min |
593 bp |
| |||
VEB | CGACTTCCATTTCCCGATGC GGACTCTGCAACAAATACGC [9] | 93°C 3 min → 40 × [93°C 1 min, 54.9°C 1 min, 72°C 1 min] → 72°C 7 min |
585 bp |
| |||
SHV | GGTTATGCGTTATATTCGCC TTAGCGTTGCCAGTGCTC [21] |
1 cycle of 5 min at 96°C; 35 cycles of 1 min at 96°C, 1 min at 60°C, 1 min at 72°C; 1 cycle of 10 min at 72°C |
867 bp |
| |||
GES | ATGCGCTTCATTCACGCAC CTATTTGTCCGTGCTCAGG [22] | 1 cycle of 5 min at 95°C; 30 cycles of 1 min at 95°C, 45 sec at 55°C, 1 min 30 sec at 72°C; 1 cycle of 8 min at 72°C |
846 bp |