Table 1.
Primer sequences used in PCR amplification of ESBL and 16S rRNA gene sequences.
Target gene | Primer sequences (5′-3′) | T m (°C) | Expected amplicon size (bp) | Reference |
---|---|---|---|---|
16S rRNA | F: AGAGTTTGATCMTGGCTCAG | 60 | 1400 | [38] |
R: AAGGAGGTGATCCAGCC | ||||
| ||||
bla SHV | F: GGTTATGCGTTATATTCGCC | 60 | 867 | [33] |
R: TTAGCGTTGCCAGTGCTC | ||||
| ||||
bla TEM | F: CCGTGTCGCCCTTATTCC | 56 | 800 | [35] |
R: AGGCACCTATCTCAGCGA | ||||
| ||||
bla CTX-M | F: TTTGCGATGTGCAGTACCAGTAA | 56 | 500 | [35] |
R: CTCCGCTGCCGGTTTTATC | ||||
| ||||
bla CTX-M-1 | F: AAAAATCACTGCGCCAGTTC | 56 | 415 | [35] |
R: AGCTTATTCATCGCCACGTT |