Table 1. Interaction of the thiazaole polyamide with the potential binding sites in sequences 1 and 2.
Site No. | Sequence | Footprint (5 μM) |
---|---|---|
1 | TCTCTG/CAGAGA | No |
2 | CCTAGT/ACTAGG | No |
3 | GCTAGT/ACTAGC | Yes |
4 | ATTAGT/ACTAAT | No |
5 | AATAGT/ACTATT | No |
6 | ACTAGT/ACTAGT | Yes |
7 | AGTAGT/ACTACT | No |
8 | ACCAGT/ACTGGT | Yes |
9 | ACAAGT/ACTTGT | No |
10 | ACGAGT/ACTCGT | No |
The final column indicates the presence or absence of a footprint with 5 μM ligand.