Table 1.
NF-Y and NC2/Dpb genes in soybean
| GmNC2/GmDpb | GmNF-YA | GmNF-YB | GmNF-YC | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | Primary ID | Characterized proteins | Name | Primary ID | Characterized proteins | Name | Primary ID | Characterized proteins | Name | Primary ID | Characterized proteins |
| GmNC2β1 | Glyma05g07750.1 | OsDR1 | GmNF-YA01 | Glyma02g35190.4 | AtNF-YA2 | GmNF-YB01 | Glyma02g17310.1 | TaNF-YB3 | GmNF-YC01 | Glyma02g09867.1 | AtNF-YC1 |
| GmNC2β2 | Glyma06g23234.1 | OsDR1 | GmNF-YA02 | Glyma02g47380.5 | AtNF-YA9 | GmNF-YB02 | Glyma02g46970.1 | AtNF-YB2 | GmNF-YC02 | Glyma03g39911.1 | AtNF-YC9 |
| GmNC2β3 | Glyma17g13260.1 | OsDR1 | GmNF-YA03 | Glyma03g36140.5 | AtNF-YA2 | GmNF-YB03 | Glyma03g18670.2 | AtNF-YB6 | GmNF-YC03 | Glyma04g37291.1 | AtNF-YC1 |
| GmNC2β4* | Glyma18g22896.1 | OsDR1 | GmNF-YA04 | Glyma05g29970.1 | AtNF-YA4 | GmNF-YB04 | Glyma03g22721.1 | TaNF-YB3 | GmNF-YC04 | Glyma06g17780.1 | AtNF-YC1 |
| GmNC2α1 | Glyma02g44500.2 | OsDRAP1 | GmNF-YA05 | Glyma07g04050.9 | AtNF-YA3 | GmNF-YB05 | Glyma03g33490.1 | ZmNF-YB2 | GmNF-YC05 | Glyma08g15700.1 | AtNF-YC9 |
| GmNC2α2 | Glyma06g04161.1 | OsDRAP1 | GmNF-YA06 | Glyma08g13090.1 | AtNF-YA4 | GmNF-YB06 | Glyma05g31681.1 | OsHAP3H | GmNF-YC06 | Glyma08g17630.1 | MtNF-YC2 |
| GmNC2α3 | Glyma06g46850.1 | OsDRAP1 | GmNF-YA07 | Glyma08g45030.1 | AtNF-YA1 | GmNF-YB07 | Glyma05g32680.1 | AtNF-YB3 | GmNF-YC07 | Glyma10g29691.1 | AtNF-YC9 |
| GmNC2α4 | Glyma13g25860.1 | OsDRAP1 | GmNF-YA08 | Glyma09g02770.2 | AtNF-YA4 | GmNF-YB08 | Glyma07g29695.1 | AtNF-YB6 | GmNF-YC08 | Glyma12g34510.1 | AtNF-YC1 |
| GmNC2α5 | Glyma14g04321.1 | OsDRAP1 | GmNF-YA09 | Glyma09g07960.4 | AtNF-YA3 | GmNF-YB09 | Glyma07g37840.2 | AtNF-YB2 | GmNF-YC09* | Glyma13g27770.2 | MtNF-YC2 |
| GmNC2α6 | Glyma15g36170.1 | OsDRAP1 | GmNF-YA10 | Glyma10g10240.2 | AtNF-YA2 | GmNF-YB10 | Glyma07g39820.1 | AtNF-YB6 | GmNF-YC10 | Glyma13g27780.2 | MtNF-YC2 |
| GmNC2α7* | Glyma19g41280.1 | OsDRAP1 | GmNF-YA11 | Glyma12g36540.6 | AtNF-YA9 | GmNF-YB11 | Glyma08g00330.2 | AtNF-YB3 | GmNF-YC11 | Glyma13g27790.1 | MtNF-YC2 |
| GmDpb3-1 | Glyma11g37130.1 | OsDRAP1 | GmNF-YA12 | Glyma13g16770.1 | AtNF-YA3 | GmNF-YB12 | Glyma08g14931.1 | AtNF-YB3 | GmNF-YC12 | Glyma13g35980.1 | AtNF-YC1 |
| GmDpb3-2 | Glyma18g01040.1 | OsDRAP1 | GmNF-YA13 | Glyma13g27230.4 | AtNF-YA9 | GmNF-YB13 | Glyma08g44140.2 | TaNF-YB3 | GmNF-YC13 | Glyma15g41486.1 | MtNF-YC2 |
| GmNF-YA14 | Glyma14g01360.1 | AtNF-YA9 | GmNF-YB14 | Glyma09g01650.1 | TaNF-YB3 | GmNF-YC14* | Glyma19g42460.1 | AtNF-YC9 | |||
| GmNF-YA15 | Glyma15g03175.1 | AtNF-YA3 | GmNF-YB15 | Glyma09g05150.2 | AtNF-YB2 | GmNF-YC15 | Glyma20g37620.1 | AtNF-YC9 | |||
| GmNF-YA16 | Glyma15g13660.2 | AtNF-YA4 | GmNF-YB16 | Glyma09g28671.1 | AtNF-YB1 | ||||||
| GmNF-YA17 | Glyma15g18970.1 | AtNF-YA3 | GmNF-YB17 | Glyma10g02480.1 | AtNF-YB2 | ||||||
| GmNF-YA18 | Glyma16g00711.1 | AtNF-YA3 | GmNF-YB18 | Glyma10g05606.1 | ZmNF-YB2 | ||||||
| GmNF-YA19 | Glyma17g05920.1 | AtNF-YA3 | GmNF-YB19 | Glyma10g29440.2 | AtNF-YB3 | ||||||
| GmNF-YA20 | Glyma18g07890.2 | AtNF-YA1 | GmNF-YB20 | Glyma10g33550.2 | AtNF-YB1 | ||||||
| GmNF-YA21 | Glyma19g38800.2 | AtNF-YA2 | GmNF-YB21 | Glyma11g18190.1 | AtNF-YB3 | ||||||
| GmNF-YB22* | Glyma11g29866.1 | ZmNF-YB2 | |||||||||
| GmNF-YB23 | Glyma13g10690.2 | ZmNF-YB2 | |||||||||
| GmNF-YB24 | Glyma15g12570.1 | AtNF-YB3 | |||||||||
| GmNF-YB25 | Glyma15g16460.2 | AtNF-YB1 | |||||||||
| GmNF-YB26 | Glyma17g00950.1 | AtNF-YB6 | |||||||||
| GmNF-YB27 | Glyma17g02810.1 | AtNF-YB1 | |||||||||
| GmNF-YB28 | Glyma18g08620.1 | TaNF-YB3 | |||||||||
| GmNF-YB29* | Glyma19g36220.2 | ZmNF-YB2 | |||||||||
| GmNF-YB30 | Glyma20g00240.1 | AtNF-YB6 | |||||||||
| GmNF-YB31* | Glyma20g34050.2 | AtNF-YB1 | |||||||||
| GmNF-YB32 | Glyma20g37870.2 | TaNF-YB3 | |||||||||
The primary ID was retrieved from Phytozome V9.1 (http://www.phytozome.net/search.php)
The sequences marked with an asterisk (*) were missing the 5′end. The characterized proteins having highest homology to the soybean proteins in alignment analyses are included for reference