Table 2. Plant pathogenic gene candidates in the B. pumilus strain GR8 genome and corresponding genes in the genomes of strains B6033 and SAFR-032.
| Function during GR8 infection | Protein | Gene for GR8 | Corresponding gene for B6033 | Corresponding gene for SAFR-032 | Description |
|---|---|---|---|---|---|
| Induce host immunity | FliC | ID12_11065 | BW16_06360 | BPUM_0150 | Induce host immunity and aid adherence27 |
| FliC | ID12_11180 | BW16_06550 | BPUM_1149 | ||
| FliC | ID12_11185 | BW16_06555 | BPUM_1152 | ||
| EF-Tu | ID12_05735 | BW16_00715 | BPUM_0099 | ||
| Invasion | Protease | ID12_17480 | BW16_12860 | BPUM_2370 | Degrade protein28 |
| Protease | ID12_17485 | BW16_12865 | BPUM_2371 | ||
| GroEL | ID12_08120 | BW16_03100 | BPUM_0535 | ||
| LepA | ID12_17000 | BW16_12350 | BPUM_2284 | ||
| Resistance to NO | NsrR | ID12_09830 | BW16_04850 | BPUM_0893 | NO detoxification32 |
| Hmp | ID12_09835 | BW16_04855 | BPUM_0894 | ||
| RocF | ID12_06065 | BW16_01045 | BPUM_0159 | ||
| Resistance to antimicrobial peptides | BceA | ID12_18605 | BW16_13990 | BPUM_2594 | Antimicrobial peptide transport33 |
| BceB | ID12_18610 | BW16_13995 | BPUM_2595 | ||
| DltA | ID12_18030 | BW16_13390 | BPUM_2479 | ||
| DltB | ID12_18025 | BW16_13395 | BPUM_2478 | ||
| DltC | ID12_18020 | BW16_13400 | BPUM_2477 | ||
| DltD | ID12_18015 | BW16_13405 | BPUM_2476 | ||
| MprF | ID12_09195 | BW16_04235 | BPUM_0787 | ||
| Phosphorus starvation tolerance | PstS | ID12_16725 | BW16_12070 | BPUM_2227 | Phosphate binding34 |
| DnaK | ID12_16980 | BW16_12330 | BPUM_2280 | ||
| Biofilm forming | LuxS | ID12_19195 | BW16_14590 | BPUM_2705 | Mediate biofilm forming35 |
| Inhibition of host cell apoptosis | PstS | ID12_16725 | BW16_12070 | BPUM_2227 | Inhibit host cell apoptosis30 |
| SdhA | ID12_18145 | BW16_13530 | BPUM_2502 |