. Author manuscript; available in PMC: 2016 Jul 1.

Published in final edited form as: Psychoneuroendocrinology. 2015 Mar 24;57:1–13. doi: 10.1016/j.psyneuen.2015.03.016

Table 1.

Probes significantly associated (p_cor<0.05) with lifetime PTSD in the white non-Hispanic male discovery cohort of n=143 cases and 28 controls, and meta-analysis of two diverse replication cohorts: a VA cohort of 51 cases and 22 controls and the DNHS cohort of 64 cases and 65 controls.

VA Discovery Sample					VA Rep. Sample			DNHS Rep. Sample			META analysis of Rep.
IlluminaID	Gene^**	t	p	p_cor	t	p	p_cor	t	p	p_cor	ED^***	p_meta	p_cor
ILMN_1658420	DSCAM	−4.88	2.77E-06^*	0.010^*	−2.14	0.036^*	0.32	0.17	0.87	0.89	-+	0.27	0.51
ILMN_1729495	TRIM41	−4.87	2.92E-06^*	0.010^*	−0.069	0.95	0.97	−0.53	0.59	0.86	--	0.64	0.77
ILMN_1756873	USP48	−4.87	2.94E-06^*	0.010^*	−0.84	0.40	0.67	−1.93	0.055	0.41	--	0.041^*	0.24
ILMN_1755990	ATP6AP1L	−4.77	4.61E-06^*	0.012^*	−1.45	0.15	0.49	−3.67	0.00036^*	0.015^*	--	0.00019^*	0.0078^*
ILMN_1652306	MEGF10	−4.67	6.92E-06^*	0.012^*	−0.53	0.60	0.72	−0.49	0.62	0.86	--	0.48	0.61
ILMN_1735353	IRX1	−4.67	6.92E-06^*	0.012^*	−1.50	0.14	0.49	−0.39	0.70	0.86	--	0.24	0.49
ILMN_2309156	PMEPA1	−4.64	7.98E-06^*	0.012^*	−1.31	0.20	0.49	−2.28	0.024^*	0.33	--	0.010^*	0.10
ILMN_1708337	NOXO1	−4.45	1.75E-05^*	0.023^*	−0.54	0.59	0.72	−1.00	0.32	0.86	--	0.26	0.51
ILMN_1729645	BBC3	−4.32	2.93E-05^*	0.030^*	−2.28	0.026^*	0.32	−1.78	0.078	0.41	--	0.0062^*	0.085
ILMN_1805345	MOSPD3	−4.26	3.73E-05^*	0.030^*	−1.57	0.12	0.49	−0.52	0.60	0.86	--	0.18	0.47
ILMN_2108823	FZD7	−4.24	4.06E-05^*	0.030^*	−2.10	0.039^*	0.32	−1.13	0.26	0.86	--	0.034^*	0.23
ILMN_1705900	ATXN10	−4.24	4.07E-05^*	0.030^*	−0.46	0.65	0.74	0.49	0.63	0.86	-+	0.90	0.97
ILMN_2282959	DNA2	−4.24	4.08E-05^*	0.030^*	−1.76	0.082	0.48	−0.19	0.85	0.89	--	0.24	0.49
ILMN_3240883	SNORA11C	−4.21	4.55E-05^*	0.030^*	−0.50	0.62	0.73	−0.67	0.51	0.86	--	0.41	0.60
ILMN_1760479	MOS	−4.20	4.71E-05^*	0.030^*	−1.19	0.24	0.51	−0.98	0.33	0.86	--	0.14	0.43
ILMN_1657478	MAGEL2	−4.19	4.97E-05^*	0.030^*	−0.99	0.33	0.64	−1.39	0.17	0.68	--	0.089	0.37
ILMN_1755920	LOC158381	−4.19	4.98E-05^*	0.030^*	−0.76	0.45	0.67	−1.63	0.10	0.48	--	0.079	0.36
ILMN_1815392	ACTRT1	−4.15	5.77E-05^*	0.032^*	−1.41	0.16	0.49	−1.76	0.080	0.41	--	0.025^*	0.21
ILMN_1747716	ALDOB	−4.14	5.85E-05^*	0.032^*	−1.29	0.20	0.49	−0.60	0.55	0.86	--	0.22	0.49
ILMN_1761598	PRDM9	−4.08	7.53E-05^*	0.039^*	−1.88	0.064	0.44	−0.52	0.61	0.86	--	0.13	0.43
ILMN_2253246	DNAJC28	−4.06	8.02E-05^*	0.039^*	−1.15	0.25	0.52	−0.34	0.73	0.86	--	0.34	0.54
ILMN_2359710	PTP4A3	−4.04	8.78E-05^*	0.040^*	−0.30	0.77	0.81	0.40	0.69	0.86	-+	0.88	0.97
ILMN_1798076	HOXD3	−4.03	8.93E-05^*	0.040^*	−0.33	0.74	0.80	−0.68	0.50	0.86	--	0.46	0.61
ILMN_1808272	KCNJ10	−4.02	9.44E-05^*	0.040^*	−1.31	0.19	0.49	−0.90	0.37	0.86	--	0.14	0.43
ILMN_2268381	RRBP1	−4.01	9.93E-05^*	0.041^*	−1.19	0.24	0.51	1.77	0.079	0.41	-+	0.47	0.61
ILMN_1696488	FGF23	−3.97	0.00011^*	0.045^*	−0.96	0.34	0.64	0.19	0.85	0.89	-+	0.68	0.80
ILMN_1792885	CTSC	−3.94	0.00013^*	0.047^*	−0.036	0.97	0.97	−1.15	0.25	0.86	--	0.34	0.54
ILMN_2214734	FRRS1	−3.94	0.00013^*	0.047^*	−2.23	0.029^*	0.32	−0.18	0.86	0.89	--	0.15	0.43
ILMN_3305849	LOC728431	−3.93	0.00013^*	0.047^*	−0.70	0.49	0.67	−0.70	0.49	0.86	--	0.33	0.54
ILMN_2387328	C9orf84	−3.92	0.00014^*	0.047^*	−0.34	0.73	0.80	−2.00	0.047^*	0.41	--	0.071	0.36
ILMN_1749834	SMIM1	−3.91	0.00014^*	0.047^*	−3.00	0.0037^*	0.15	0.36	0.72	0.86	-+	0.16	0.43
ILMN_1794780	SHARPIN	−3.89	0.00016^*	0.047^*	−0.76	0.45	0.67	−0.39	0.70	0.86	--	0.45	0.61
ILMN_1762319	SLC43A3	−3.88	0.00016^*	0.047^*	−1.51	0.13	0.49	−0.50	0.62	0.86	--	0.20	0.48
ILMN_2259495	BID	−3.88	0.00016^*	0.048^*	0.74	0.46	0.67	−0.43	0.67	0.86	+-	0.93	0.97
ILMN_1807556	VWA3A	−3.86	0.00017^*	0.048^*	−1.29	0.20	0.49	−2.79	0.0061^*	0.13	--	0.0030^*	0.061
ILMN_1778294	SENP7	−3.86	0.00017^*	0.048^*	−0.77	0.45	0.67	0.73	0.46	0.86	-+	0.88	0.97
ILMN_1713458	HBZ	−3.85	0.00018^*	0.048^*	−0.71	0.48	0.67	0.43	0.67	0.86	-+	0.95	0.97
ILMN_2359500	NCDN	−3.85	0.00018^*	0.048^*	−0.59	0.55	0.71	−0.76	0.45	0.86	--	0.34	0.54
ILMN_1803941	TBC1D15	3.83	0.00019^*	0.0498^*	−0.63	0.53	0.71	−0.27	0.79	0.89	--	0.56	0.69
ILMN_1753627	DOLK	−3.82	0.00020^*	0.0499^*	−0.69	0.49	0.67	0.54	0.59	0.86	-+	0.98	0.98
ILMN_1813650	INPP5F	−3.82	0.00020^*	0.0499^*	−1.49	0.14	0.49	0.053	0.96	0.96	-+	0.41	0.60

indicates significant at the .05 level.

^**

Symbol from the updated annotations in illuminaHumanv4.db.;

^***

ED= Effect Direction in the replication cohorts.