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. 2015 May 19;10(5):e0125926. doi: 10.1371/journal.pone.0125926

Table 4. Analysis of Allelic Association of SNP rs9943582with Overall CAD and CAD without LVSD.

Cohort (n, case/control) Count of Genotype in cases Count of Genotype in controls Freq _A(case/control) Observed* Adjust Empirical Corrected
P-obs OR (95%CI) P-adj OR (95%CI) P-emp P-cor
AAA AAG GGG AAA AAG GGG
Overall CAD
  Entire cohort (1,751/1,022) 148 653 950 74 382 566 0.27/0.26 0.34 1.06 (0.94–1.20) 0.22 1.08 (0.95–1.23) 0.35 -
  Male(1,056/608) 80 382 594 49 223 336 0.26/0.26 0.64 0.96 (0.82–1.13) 0.94 0.99 (0.84–1.17) 0.65 0.87
  Female (695/414) 68 271 356 25 159 230 0.29/0.25 0.04 1.23 (1.00–1.49) 0.05 1.22 (1.00–1.49) 0.04 0.08
  Hypertension (1,030/525) 92 361 577 40 183 302 0.27/0.25 0.28 1.10 (0.93–1.30) 0.23 1.01 (0.84–1.22) 0.30 0.48
  Non-hypertension (721/497) 56 292 373 34 199 264 0.28/0.27 0.72 1.03 (0.86–1.24) 0.91 1.11 (0.93–1.32) 0.75 0.92
CAD with normal LVEF
  Entire cohort (1046/1022) 76 382 588 74 382 566 0.26/0.26 0.77 0.98 (0.85–1.13) 0.95 0.99 (0.86–1.15) 0.85 -
  Male(634/608) 39 231 364 49 223 336 0.24/0.26 0.25 0.90 (0.75–1.08) 0.36 0.92 (0.76–1.11) 0.25 0.44
  Female(412/414) 37 151 224 25 159 230 0.27/0.25 0.34 1.11 (0.89–1.39) 0.35 1.11 (0.89–1.39) 0.34 0.56
  Hypertension(613/525) 44 218 351 40 183 302 0.25/0.25 0.96 1.00 (0.83–1.22) 0.91 1.01 (0.83–1.23) 1.00 0.99
  Non-hypertension(433/497) 32 164 237 34 199 264 0.26/0.27 0.72 0.96 (0.78–1.18) 0.81 0.97 (0.79–1.20) 0.75 0.92

Freq _A: Frequency of A allele. LVSD: left ventricle systolic dysfunction, LVEF: left ventricle eject fraction.

*Uncorrected P value and odds ratio (OR) using Chi-square tests with Pearson’s 2×2.

Adjusted P value by multivariate logistic regression analysis for potential confounders including age, gender, smoking, hypertension, diabetes mellitus and lipid concentrations (Tch, TG, HDL-c and LDL-c).

Empirical P values were calculated using 100,000 Monte Carlo simulations

Multiple testing was adjusted by Bonferroni correction