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. 2015 May 20;10(5):e0126609. doi: 10.1371/journal.pone.0126609

Table 1. INT Primer and Quencher Probe Sequences.

Primer Name HXB2 Location Sequence (5’ → 3’)
F3 4901–4920 GGTTTATTACAGGGACAGCA
B3 5070–5087 ATCCTGTCTACTTGCCAC
LoopF 4943–4962 CTTTCCAGAGAAGCTTTGCT
LoopB-HEX 5021–5042 HEX-AGCAAAGATCATTAGGGATTAT
FIP 4963–4986, 4923–4942 CTTGTATTACTACTGCCCCTTCACGATCCACTTTGGAAAGGACC
BIP 4994–5018, 5051–5069 TGACATAAAAGTAGTGCCAAGAAGATTTTACAATCATCACCTGCCATC
LoopB-Q 5021–5034 TAATGATCTTTGCT-BHQ1