Table 1. INT Primer and Quencher Probe Sequences.
Primer Name | HXB2 Location | Sequence (5’ → 3’) |
---|---|---|
F3 | 4901–4920 | GGTTTATTACAGGGACAGCA |
B3 | 5070–5087 | ATCCTGTCTACTTGCCAC |
LoopF | 4943–4962 | CTTTCCAGAGAAGCTTTGCT |
LoopB-HEX | 5021–5042 | HEX-AGCAAAGATCATTAGGGATTAT |
FIP | 4963–4986, 4923–4942 | CTTGTATTACTACTGCCCCTTCACGATCCACTTTGGAAAGGACC |
BIP | 4994–5018, 5051–5069 | TGACATAAAAGTAGTGCCAAGAAGATTTTACAATCATCACCTGCCATC |
LoopB-Q | 5021–5034 | TAATGATCTTTGCT-BHQ1 |