Table 1.
HSV-1 isolates analyzed
| Isolate a | Genotype b | Pattern no. c | Accession no. of nucleotide sequences of the region encompassing reiteration VII |
|---|---|---|---|
| K47 | F1 | 1 | AB856424 |
| K94 | F2 | 1 | AB856425 |
| K41 | F4 | 1 | AB856426 |
| Ty179 | F6 | 1 | AB856427 |
| K90 | F11 | 1 | AB856428 |
| Ty127 | F11 | 1 | AB856429 |
| Ty170 | F21 | 1 | AB856430 |
| K44 | F22 | 1 | AB856431 |
| Ty157 | F23 | 1 | AB856432 |
| K40 | F24 | 1 | AB856433 |
| Ty24 | F26 | 1 | AB856434 |
| K46 | F34 | 1 | AB856435 |
| K59 | F11 | 2 | AB856436 |
| C85 | F85 | 3 | AB426486 |
| K79 | F1 | 4 | AB856437 |
| K93 | F1 | 4 | AB856438 |
| K82 | F1 | 4 | AB856439 |
| Ty145 | F1 | 4 | AB856440 |
| Ty148 | F1 | 4 | AB856441 |
| Ty16 | F13 | 4 | AB856442 |
| K26 | F27 | 4 | AB856443 |
| Ty14 | F30 | 4 | AB856444 |
| Ty35 | F30 | 4 | AB856445 |
| Ty128 | F33 | 4 | AB856446 |
| Ty2 | F1 | 5 | AB856447 |
| Ty15 | F1 | 5 | AB856448 |
| Ty23 | F7 | 5 | AB856449 |
| Ty3 | F9 | 5 | AB856450 |
| K84 | F17 | 5 | AB856451 |
| K80 | F26 | 5 | AB856452 |
| Ty21 | F29 | 5 | AB856453 |
| K60 | F31 | 5 | AB856454 |
| Ty1 | F31 | 5 | AB856455 |
| Ty109 | F25 | 6 | AB856456 |
| Ty102 | F14 | 7 | AB856457 |
| Ty119 | F16 | 7 | AB856458 |
| K76 | F16 | 8 | AB856459 |
| Ty153 | F16 | 9 | AB856460 |
| K57 | F1 | 10 | AB856461 |
| Ty43 | F4 | 10 | AB856462 |
| K54 | F5 | 10 | AB856463 |
| K63 | F15 | 10 | AB856464 |
| Ty149 | F25 | 10 | AB856465 |
| Ty169 | F28 | 10 | AB856466 |
| K53 | F32 | 10 | AB856467 |
| Ty44 | F35 | 10 | AB856468 |
| K86 | F35 | 10 | AB856469 |
| C81 | F35 | 10 | AB426482 |
| K81 | F1 | 11 | AB856470 |
| K78 | F35 | 12 | AB856471 |
| Ty161 | F17 | 13 | AB856472 |
| Ty25 | F35 | 13 | AB856473 |
| Ty106 | F35 | 13 | AB856474 |
| Ty129 | F35 | 13 | AB856475 |
| K43 | F8 | 14 | AB856476 |
| K42 | F19 | 15 | AB856477 |
| K56 | F20 | 16 | AB856478 |
| Ty141 | F25 | 17 | AB856479 |
| Ty98 | F12 | 18 | AB856480 |
| Y68 (isolate 1) | F83 | 18 | AB266255 |
| K8 | F35 | 19 | AB856481 |
| Y70 (isolate 6) | F84 | 20 | AB266260 |
aThe nucleotide sequences of the region encompassing reiteration VII of 62 HSV-1 isolates listed in Table 1 were examined in the present study.
bThe genotypes of 62 HSV-1 isolates listed in Table 1 were previously determined on the basis of the situation of 20 RFLPs, which were distributed on the L component of HSV-1 DNA (Umene et al. 2009; Umene et al. 2007; Umene and Yoshida 1993).
cThe 62 HSV-1 isolates listed in Table 1 were classified into twenty groups, named pattern no. 1 (PN-1) to 20 (PN-20), on the basis of the nucleotide sequences of the region encompassing reiteration VII (Table 2).