Table 1.
Name | Use | URL |
---|---|---|
miRBase | Database for miRNA sequences and gene annotations | http://www.mirbase.org/ |
miRNASNP | Database for miRNA gene variants, location annotation, RNA secondary structure impact prediction, target impact prediction for seed variants | http://bioinfo.life.hust.edu.cn/miRNASNP2/index.php |
miRNA SNiPer | Database for miRNA gene variants, location annotation | http://www.integratomics-time.com/miRNA-SNiPer/ |
miRvar | Database for miRNA gene variants, location annotation, predicted impact on Dicer and RISC loading | http://genome.igib.res.in/mirlovd/home.php |
PolymiRTS Database | Database with miRNA seed variants and predicted effect on targeting | http://compbio.uthsc.edu/miRSNP/ |
dPORE-miRNA | Database with miRNA promoter variants and their predicted effect on transcription binding | http://cbrc.kaust.edu.sa/dpore/ |
The Use column refers to the usage described in the text. Most of the databases also incorporate other information not mentioned here.