TABLE 2.
MVA-derived epitope sequences at 1.5 hpia
| Sequence | Length (aa) | PEAKS score (−10logP) | Label mass (Da) | NetMHC binding affinity (nM) | HLA allele | GenBank protein accession no. | MVA protein |
|---|---|---|---|---|---|---|---|
| IIGPMFSGK8 | 9 | 31.93 | +8.01 | 46 (SB) | A*03:01 | CAM58264.1 | Thymidine kinase |
| MWGGGSSSGVK8 | 11 | 40.23 | +8.01 | 3,541 | C*04:01 | CAM58186.1 | Hypothetical 5.6-kDa protein |
| RIISYNPPPK | 10 | 29.40 | 30 (SB) | A*03:01 | CAM58216.1 | iActA-like 8-kDa cytoplasmic protein | |
| SPRIGDQL | 8 | 29.23 | 146 (WB) | B*07:02 | CAM58292.1 | Major core protein P4b | |
| ARPINGISY | 9 | 28.60 | 7,395 | C*07:02 | CAM58292.1 | Major core protein P4b |
a
K8, heavy lysine, +8.01 Da; K, unlabeled lysine; R, unlabeled arginine; SB, strong binder; WB, weak binder; −10logP, negative decadic logarithm of P, the probability that the identification is a random event.