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. Author manuscript; available in PMC: 2015 May 26.
Published in final edited form as: Int J Mass Spectrom. 2014 Jul 15;368:6–14. doi: 10.1016/j.ijms.2014.04.009

Table 1.

Cross sections of selected [Pep+2H]2+ palmitoylated peptide ions.

Peptide sequencea # of residues Unmodified peptide mass (Da)b Unmodified peptide Ω (Å2) Pal-peptide mass (Da)c Pal-peptide Ω (Å2) ΔΩ (Å)d # of Pal group(s) ΔΩ per Pal group (Å2)
CHDFR 5 676.28 185.4 914.51 239.3 53.9 1 53.9
MGCDR 5 580.21 173.7 818.44 217.7 44.0 1 44.0
MCILK 5 606.32 182.1 844.55 230.2 48.2 1 48.2
MACLK 5 564.28 179.3 802.50 218.0 38.7 1 38.7
CENLVK 6 704.35 192.6 942.58 242.9 50.3 1 50.3
MACLLR 6 705.37 203.8 943.59 248.2 44.4 1 44.4
HGCIVK 6 655.35 204.8 893.57 249.2 44.4 1 44.4
FCFPLK 6 753.39 219.9 991.61 262.4 42.5 1 42.5
VCHCLGK 7 758.36 199.8 1234.81 295.0 95.2 2 47.6
DFCFPLK 7 868.42 223.6 1106.64 267.0 43.4 1 43.4
MPLACLR 7 802.42 223.6 1040.64 262.3 38.7 1 38.7
MTVCGGK 7 694.31 182.2 1170.76 279.3 97.1 2 48.6
VGIHLCIK 8 881.52 228.5 1119.75 275.2 46.7 1 46.7
MPALACLR 8 873.46 228.3 1111.68 269.9 41.6 1 41.6
IPCCPVNLK 9 985.51 232.3 1461.96 323.1 90.7 2 45.4
VIEVVQGACR 10 1072.57 240.2 1310.80 290.5 50.3 1 50.3
IAFQELLCLR 10 1204.66 271.6 1442.89 315.6 44.0 1 44.0
Average ΔΩ per Pal group: 45.5 ± 4.1
a

Bold letters indicate palmitoylation sites.

b

Peptide masses are calculated from the molecular compositions.

c

Palmitoylated peptide masses are calculated from the molecular compositions. The number and location of the palmitoylation sites in the amino acid sequence are provided.

d

ΔΩ is the change in cross section after palmitoylation, defined as: ΔΩ = ΩPal peptide − Ωunmodified peptide