Table 2.
The proportion of each theoretically possible genotype in the monomorphic SNP loci
| Genotype | Probe | Percentage of parental and non-parental genotype a | PNPG c | |||
|---|---|---|---|---|---|---|
| AA | AB | BB | NC | |||
| AA | 1317 | 0.998 b | 8.91E-05 | 9.76E-05 | 1.42E-03 | 1.60E-03 |
| AB | 16 | 3.49E-04 | 0.988 | 1.05E-03 | 1.01E-02 | 1.15E-02 |
| BB | 1441 | 1.51E-04 | 1.24E-04 | 0.998 | 1.83E-03 | 2.10E-03 |
| NC | 574 | 9.73E-06 | 9.73E-06 | 9.73E-06 | 1.000 | 2.92E-05 |
| Total | 3348 | 1.60E-03 | ||||
aPercentages of parental and non-parental genotype are calculated as: number of each detected genotype/(179 analyzed DH lines × probe number for each genotype).
bPercentages of parental genotypes were bolted.
cPercentage of non-parental genotype.