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. 2015 May 28;16(1):416. doi: 10.1186/s12864-015-1633-y

Table 1.

Summary of the B. argenteum transcriptome assembly and annotation

Reads Total Raw Reads 62,112,418
Total Clean Reads 54,787,000
Clean Nucleotides (nt) 4,930,830,000
Reads length (nt) 90 × 2
Q20 percentage 98.67 %
GC percentage 52.05 %
Contigs Total Number 106,066
Total Length (nt) 43,542,237
Mean Length (nt) 411
N50 (nt) 908
Unigenes Total Number 57,247
Distinct Clusters 14,108
Distinct Singletons 43,139
Total Length (nt) 49,383,291
Mean Length (nt) 863
N50 (nt) 1,372
L50 number 11,094
Min Unigene Length (nt) 200
Max Unigene Length (nt) 14,247
Average Depth (×) 85.38
Annotation NCBI-nr 35,813 (62.6 %)
Swiss-Prot 20,864 (39.9 %)
KEGG 21,607 (37.7 %)
COG 16,715 (29.2 %)
GO 23,509 (41.1 %)
All 36,446 (63.7 %)