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. 2015 Apr 27;43(10):4868–4880. doi: 10.1093/nar/gkv388

Table 2. Dissociation constants for LSD1 complex binding to nucleosomes with different length extranucleosomal DNA at 50 mM NaCl.

Label position DNA length Histones DNA format Kd (nM) Relative to 147 bp
H3 K27C 147 WT 1 + 145 + 1 1641 ± 211 1.0
151 WT 3 + 145 + 3 716 ± 100 2.3
155 WT 5 + 145 + 5 419 ± 23 3.9
157 WT 6 + 145 + 6 470 ± 64 3.5
159 WT 7 + 145 + 7 236 ± 40 7.0
161 WT 8 + 145 + 8 232 ± 29 7.1
163 WT 9 + 145 + 9 237 ± 22 6.9
165 WT 10 + 145 + 10 205 ± 26 8.0
169 WT 12 + 145 + 12 282 ± 68 5.8
177 WT 16 + 145 + 16 214 ± 35 7.7
181 WT 18 + 145 + 18 100 ± 27 16.2
185 WT 20 + 145 + 20 135 ± 27 12.1
207 WT 31 + 145 + 31 263 ± 27 6.2
151L WT 5 + 145 + 1 718 ± 31 2.3
161L WT 15 + 145 + 1 406 ± 52 4.0
177L WT 31 + 145 + 1 769 ± 174 2.1
177 Acidic patch mutation 16 + 145 + 16 98 ± 27 16.7
H3 A21C 147 WT 1 + 145 + 1 81.0 ± 9.0 1.0
157 WT 6 + 145 + 6 17.6 ± 1.9 4.6
181 WT 18 + 145 + 18 3.8 ± 1.1 21.4
207 WT 31 + 145 + 31 3.0 ± 1.3 27.2