Table 3. Pucker distributions for TTA/UUAs of all type-1 loops.
1KF1-a | 1KF1-b | 1KF1-c | 1K8P | 3IBK | 3CDM-a | 3CDM-b | 3CDM-c | 3CDM-d | 3CE5 | 3SC8 | 3UYH | 3T5E-a | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T | C1’-exo | C1’-exo | C1’-exo | C1’-exo | C1’-exo | C1’-exo | C4’-exo | C1’-exo | C1’-exo | C1’-exo | C1’-exo | C1’-exo | C2’-endo |
T | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo |
A | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C1’-exo | C2’-endo | C2’-endo | C2’-endo | C2’-endo |
3T5E-b | 3T5E-c | 4DA3 | 4DAQ | 3R6R-a | 3R6R-b | 3R6R-c | 4FXM-a | 4FXM-b | 4FXM-c | 4G0F-a | 4G0F-b | 4G0F-c | |
T | C1’-exo | C2’-endo | C1’-exo | C1’-exo | C1’-exo | C1’-exo | C4’-exo | C2’-endo | C1’-exo | C1’-exo | C2’-endo | C2’-endo | C2’-endo |
T | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo | C3’-endo |
A | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C2’-endo | C1’-exo | C1’-exo | C2’-endo |
Yellow indicates a sugar which deviates from the consensus pucker conformation. Lower-case letters denote crystallographically unique type-1 loops within a single crystal structure.