Table 3. Summary of insertions and deletions in the human genome (ratio: deletion/insertion).
Methods | insertion | deletion | ratio | inserted base | deleted base | ratio (base) | % GC insertion | % GC deletion |
---|---|---|---|---|---|---|---|---|
Seq-align | 204282 | 491037 | 2.40 | 402554 | 1221722 | 3.03 | 0.349 | 0.365 |
θ 1 | 534245 | 830413 | 1.55 | 2217770 | 23439382 | 10.57 | 0.372 | 0.399 |
θ 2 | 463693 | 715306 | 1.54 | 3993462 | 14434339 | 3.61 | 0.403 | 0.398 |
All | 125424 | 325099 | 2.59 | 251301 | 825430 | 3.28 | 0.347 | 0.364 |
Any | 408917 | 725312 | 1.77 | 1245483 | 14295582 | 11.48 | 0.366 | 0.398 |
θ 1 &θ 2 | 352473 | 596505 | 1.69 | 1138427 | 13981366 | 12.28 | 0.369 | 0.399 |