TABLE 3.
MLST allelic profiles of selected isolates representing the different PFGE MRPs
| Flock | Isolate | PFGE MRP | Allelic profilea
|
STa | Com- plexa | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| aspA | glnA | gltA | glyA | pgm | tkt | uncA | |||||
| 1 | F1C8 | 01 | 02 | 75 | 04 | 48 | 103 | 34 | 01 | 661 | UNb |
| F1E3 | 01 | 02 | 75 | 04 | 48 | 103 | 34 | 01 | 661 | UN | |
| 2 | F2C2 | 01 | 02 | 75 | 04 | 48 | 103 | 34 | 01 | 661 | UN |
| F2C7 | 01 | 02 | 75 | 04 | 48 | 103 | 34 | 01 | 661 | UN | |
| F2C10 | 01 | 02 | 75 | 04 | 48 | 103 | 34 | 01 | 661 | UN | |
| F2C1 | 02 | 02 | 75 | 12 | 03 | 02 | 62 | 25 | NDc | ST21 | |
| F2C9 | 03 | 02 | 01 | 04 | 03 | 02 | 34 | 01 | ND | ST21 | |
| F2E1 | 03 | 02 | 01 | 04 | 03 | 02 | 34 | 01 | ND | ST21 | |
| F2E3 | 03 | 02 | 01 | 04 | 03 | 103 | 34 | 01 | ND | ST21 | |
| F2E6 | 03 | 02 | 01 | 04 | 03 | 02 | 34 | 01 | ND | ST21 | |
| F2E2 | 04 | 02 | 75 | 12 | 03 | 02 | 62 | 05 | ND | ST21 | |
| 3 | F3C2 | 05 | 02 | 75 | 04 | 48 | 141 | 34 | 01 | 814 | UN |
| F3C3 | 05 | 02 | 75 | 04 | 48 | 141 | 34 | 01 | 814 | UN | |
| F3C8 | 05 | 02 | 75 | 04 | 48 | 141 | 34 | 01 | 814 | UN | |
a
Allelic profiles, STs, and complexes were obtained from the MLST website (http://mlst.zoo.ox.ac.uk) (9).
b
UN, currently not assigned to a lineage.
c
ND, not defined (between five and eight close matches).