Table 4.
Whole-network path length with false information
| Prior connections | p <0.05 (uncorrected) Path length | p <0.05 (Bonf.) Path length | FDR <0.05 Path length | |||
|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | 1 | 1 | |
| 3969 true + 396 false | 3969 | - | - | 1 | 3671 | 3930 |
| 3969true + 992 false | 3969 | - | - | 1 | 3653 | 3918 |
| 3969 true + 1984 false | 3969 | - | 1 | - | 3640 | 3899 |
| 3969 true + 2976 false | 3969 | - | 1 | 1 | 3655 | 3874 |
| 3969 true + 3969 false | 3968 | 1 | 1 | 1 | 3659 | 3859 |
Path length of significant interactions confirmed by PANDA on the whole regulatory network with the presence of different amounts of noisy prior information.