Table 1. Table of high-confidence candidate eQTL with location of the gene, LOD score, and p-value for association between gene expression and bone trait.

Trait	Gene	Chromosome	Position (Mb)	eQTL LOD	p-value for association
diaphyseal total density	GNS	1	36	3.8	0.00018
diaphyseal endosteal circumference	GNS	1	36	3.8	0.00161
diaphyseal cortical density	603961757F1	1	37	5.6	0.00198
diaphyseal cortical density	uncharacterized gene	1	37	4.6	0.00060
diaphyseal cortical area	TSTA3	2	155	3.5	0.00030
diaphysal total content	KHDRBS3	2	149	4.0	0.00005
diaphysal total content	TSTA3	2	155	3.5	0.00001
diaphysal total content	PTK2	2	151	8.0	0.00247
diaphyseal cortical thickness	KHDRBS3	2	149	4.0	0.00001
diaphyseal cortical thickness	TSTA3	2	155	3.5	0.00037
diaphyseal cortical thickness	MRPS18A	3	32	2.5	0.00039
diaphyseal cortical thickness	uncharacterized gene	3	32	8.2	0.00165
diaphyseal endosteal circumference	CENPO	3	108	2.9	0.00019
diaphyseal medullary area	603847051F1	3	99	3.0	0.00000
diaphyseal medullary area	603846396F1	3	113	6.2	0.00050
diaphyseal medullary area	603961442F1	3	113	6.7	0.00053
diaphyseal medullary content	COL11A1	8	12	2.7	0.00024
diaphyseal total area	RAB24	13	10	4.2	0.00027
diaphyseal total area	SIMC1	13	10	4.3	0.00122
diaphyseal medullary area	DBN1	13	10	2.8	0.00301
metaphyseal total content	B4GALT7	13	10	10.0	0.00342
metaphyseal total content	osteonectin	13	13	2.8	0.00026
diaphyseal cortical thickness	HSF5	19	1	4.3	0.00035
diaphyseal cortical thickness	ISGF9B	24	2	3.4	0.00069
diaphyseal cortical thickness	POU2AF1	24	4	2.6	0.00414