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Assembly of Simulated HP Diploid Genome with Moderate Polymorphism Rate (5%) and Uneven SNP Distribution Based on C. dubliniensis Haplome
| Velvet | SPAdes | HaploMerger | dipSPAdes | |
|---|---|---|---|---|
| Expected total length (Mbp) | 29.2 | 29.2 | 14.6 | 14.6 |
| Total length (Mbp) | 13.91 | 28.29 | 14.26 | 13.73 |
| No. contigs | 18136 | 2506 | 1146 | 97 |
| Largest contig | 3415 | 91821 | 91821 | 1301944 |
| NA50 | 765 | 19823 | 21288 | 397065 |
| NA75 | 612 | 10897 | 11821 | 169301 |
| No. misassemblies | 0 | 0 | 0 | 2 |
