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Joint Assembly of Two S. commune (A8 and B3) Genomes
| HaploMerger | Velvet | SPAdes | dipSPAdes | |
|---|---|---|---|---|
| Expected total length (Mbp) | 38.9 | 77.8 | 77.8 | 38.9 |
| Total length (Mbp) | 36.00 | 70.75 | 73.26 | 37.99 |
| No. contigs | 981 | 8358 | 4289 | 969 |
| Largest contig | 1677298 | 186960 | 510594 | 1568684 |
| N50 | 386031 | 19416 | 82552 | 375236 |
| N75 | 141045 | 9707 | 34743 | 104312 |
Haplocontigs in SPAdes were generated as a mixture of contigs from separate assemblies of A8 and B3.
