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. Author manuscript; available in PMC: 2015 May 31.
Published in final edited form as: Bone. 2012 Jul 24;51(4):688–694. doi: 10.1016/j.bone.2012.07.010

Table 5.

Summary of variance component analyses of BMI and CR_PC variation with simultaneous adjustment for fat-related covariates and testing for G-C-G haplotype effect.

Parameter M(BMI) M0(BMI) M(CR_PC) M0(CR_PC)
σAD2 0.063 ± 0.014 0.066 0.113 ± 0.021 0.113
σRS2 0.092 ± 0.012 0.091 0.100 ± 0.016 0.103
α0 0.036 ± 0.018 0.037 0.075 ± 0.023 0.077
β1 0.878 ± 0.046 0.880 0.967 ± 0.054 0.969
β2 0.057 ± 0.022 0.063 0.004 ± 0.026 0.012
β3 0.085 ± 0.039 0.084 0.011 ± 0.046 0.010
β4 −0.044 ± 0.016 (F) 0 −0.054 ± 0.019 (F) 0
Log(LH) −325.216 −328.901 −414.444 −418.453
LHR (p-value) 0.006 0.005

M(BMI) and M(CR_PC) are the general models of BMI and CR_PC variation, respectively. These two models include parameter estimates of the contribution of the fat-related (FM, PLL and SK_PC) covariates and G-C-G haplotype, as well as contribution of the putative additive genetic, σAD2 and environmental, σRS2 factors. M0(BMI) and M0(CR_PC) are the restricted models, in which contribution of the G-C-G haplotype, measured by regression coefficient β4, was neglected (restricted to null). Contribution of fat-related covariates as measured by the regression coefficients, β1, β2, and β3, respectively was allowed; α0: regression intercept. 898 individuals, in whom the M1–M2–M3 haplotypes have been unambiguously reconstructed, were included in this analysis. The restricted models show that despite highly substantial contribution of the fat-related phenotypes to variation of BMI and CR_PC, the contribution of G-C-G haplotype to their respective variations cannot be neglected without significant loss of data fitting, and therefore these models were rejected.