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. 2015 Jun 1;10(6):e0129085. doi: 10.1371/journal.pone.0129085

Table 1. Primers used to completely sequence the ESBL/AmpC resistance genes.

Gene family Primer (5’-3’) Purpose Reference
ACC group gcatgctgattggcgtgc PCR & Sequencing This study
cagccgctgatgcagaag Sequencing
ccccatattggcttgcac Sequencing
agggcgtgctgtaatacc PCR & Sequencing
ACT & MIR group cacagtcaaatccaacagac PCR & Sequencing This study
ctataagtaaaaccttcaccg Sequencing
cgtaatgcgcctcttccg Sequencing
tttttgtaggccgggtaag PCR & Sequencing
agcgccacccggcaatg PCR & Sequencing
AmpC promoter region aatgggttttctacggtctg PCR & Sequencing [16]
gggcagcaaatgtggagcaa PCR & Sequencing
CMY-2 group atgatgaaaaaatcgttatgctgc PCR & Sequencing [17]
ctccagcattggtctgtttg Sequencing This study
agttcagcatctcccagcc Sequencing
gcttttcaagaatgcgccagg PCR & Sequencing [18]
CTX-M-1 group gtgtgagaagcagtctaaa PCR & Sequencing This study
cggaaggagaaccaggaa PCR & Sequencing
Ctgggtgtggcattgatt Sequencing
Ctgggtaaagcattgggt Sequencing
Cccgaggtgaagtggtat Sequencing
Gcacacttcctaacaaca Sequencing
CTX-M-2 group Atgatgactcagagcattcg PCR & Sequencing [19]
Ttattgcatcagaaaccgtg PCR & Sequencing
CTX-M-9 group Tggtgacaaagagagtgcaacg PCR & Sequencing [20]
Tcacagcccttcggcgat PCR & Sequencing
DHA group Gtgaatctgacgatacttgc PCR & Sequencing This study
Tcacaggtgtgctgggtg Sequencing
Taaccgtacgcatactggc Sequencing
Aataatcttaaattacggccc PCR & Sequencing
Tccgcaggggcctgttcag PCR & Sequencing
SHV Ttatctccctgttagccacc PCR & Sequencing [17]
Gatttgctgatttcgctcgg PCR & Sequencing
TEM Gcggaacccctatttg PCR & Sequencing [21]
Accaatgcttaatcagtgag PCR & Sequencing