Table 1. Epidemiological, and genotypic characteristic of E. coli O157:H7 strains.
Strain | Host | Location | Origin | Isolation year | Stx1 | Stx2 | Stx2 subtype | Clade as in [28] (nts SNP 539, 1060, 438, 630) 2 | Clade x 32 3 | Stx2 integration loci |
---|---|---|---|---|---|---|---|---|---|---|
EDL933 | Human, | patient | USA | + | + | stx2a | 3 (C-G-C-T) | clade 3 | wrbA | |
146N | Bovine | abattoir | ARG | + | + | stx2c | 3(C-G-C-T) | ND | yehV | |
438/99 | Bovine | abattoir | ARG | 1999 | - | + | stx2c | 3(C-G-C-T) | ND | ND* |
7.1 Anguil | Bovine | farm 1 | ARG | 2009 | - | + | stx2a-stx2c | none (C-T-C-T) | clade 6 | |
9.1 Anguil | Bovine | farm 1 | ARG | 2009 | - | + | stx2a-stx2c | none(A-T-C-T) | clade 8 | yehV |
Vac 07–1 | Bovine | farm 1 | ARG | 2007 | - | + | stx2a-stx2c | none-(A-G-C-T) | clade 8 | |
125/99 | Human | patient | ARG | - | + | stx2a | none- (A-G-C-T) | clade 8 | yehV | |
Rafaela II- 827 | Bovine | farm 1 | ARG | 2009 | - | + | stx2a-stx2c | none-(A-G-C-T) | clade 8 | ND* |
Balcarce 14.2 | Bovine | farm 1 | ARG | 2009 | - | + | stx2a-stx2c | none- (A-G-C-T) | clade 6 | yehV |
Balcarce 24.2 | Bovine | farm 1 | ARG | 2009 | - | + | stx2a-stx2c | none- (A-G-C-T) | clade 8 | |
Neuquén 7562 | Human | patient | ARG | 2003 | - | + | stx2c | none-(A-G-C-T) | clade 8 | yehV |