Table 6. Gene Set Analysis (GSA) Using Ingenuity Pathway Analysis (IPA).
Set Name | GSA Score | GSA p-value | GSA FDR (%) |
---|---|---|---|
KEGG_HEMATOPOIETIC_CELL_LINEAGE | 0.634 | <0.001 | <0.1 |
BIOCARTA_CALCINEURIN_PATHWAY | 0.688 | <0.001 | <0.1 |
BIOCARTA_CCR5_PATHWAY | 0.857 | <0.001 | <0.1 |
KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION | 0.385 | <0.001 | <0.1 |
G_PROTEIN_COUPLED_RECEPTOR_BINDING | 0.667 | <0.001 | <0.1 |
METALLOPEPTIDASE_ACTIVITY | 0.457 | <0.001 | <0.1 |
CHEMOKINE_ACTIVITY | 0.684 | <0.001 | <0.1 |
CHEMOKINE_RECEPTOR_BINDING | 0.787 | <0.001 | <0.1 |
METALLOENDOPEPTIDASE_ACTIVITY | 0.647 | <0.001 | <0.1 |
BEHAVIOR | 0.499 | <0.001 | <0.1 |
LOCOMOTORY_BEHAVIOR | 0.690 | <0.001 | <0.1 |
INFLAMMATORY_RESPONSE | 0.422 | <0.001 | <0.1 |
RESPONSE_TO_EXTERNAL_STIMULUS | 0.352 | <0.001 | <0.1 |
RESPONSE_TO_WOUNDING | 0.415 | <0.001 | <0.1 |
KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION | 0.483 | 0.002 | 4.5 |
BIOCARTA_CARDIACEGF_PATHWAY | 0.651 | 0.002 | 4.5 |
KEGG_CHEMOKINE_SIGNALING_PATHWAY | 0.287 | 0.002 | 4.5 |
GSA identified 17 processes associated with the DEGs from linear regression analysis with FDR threshold <5%.