Table 4. Multivariate logistic regression models for mclx3 pseudogenization (p values < 0.05 are highlighted).

		multivariate ORs (95% CI)
mclx3		Model 1	Model 2	Model 3
patient-related
gender	female	-	-	0.532(0.149–1.893); p = 0.330; B = -0.631; S.E. = 0.648; Wald = 0.950
	male	-	-	1 (ref)
house setting	rural	-	-	1 (ref)
	urban	-	-	0.433 (0.118–1.593); p = 0.208; B = -0.837; S.E. = 0.665; Wald = 1.586
birth region		-	-	p = 0.009; Wald = 15.307
	Africa	-	-	0.000 (0.000-.); p = 0.998; B = -20.087; S.E. = 8006.116; Wald = 0.000
	The Americas	-	-	0.929 (0.148–5.849); p = 0.938; B = -0.074; S.E. = 0.939; Wald = 0.006
	Eastern Mediterranean	-	-	0.433 (0.077–2.446); p = 0.344; B = -0.837; S.E. = 0.883; Wald = 0.897
	Europe	-	-	1 (ref)
	South East Asia	-	-	3.479 (0.657–18.431); p = 0.143; B = 1.247; S.E. = 0.851; Wald = 2.149
	Western Pacific	-	-	77.372 (6.357–941.774); p = 0.001; B = 4.349; S.E. = 1.275; Wald = 11.631
microorganism-related
transmissibility	no	-	0.761 (0.280–2.070); p = 0.593; B = -0.273; S.E. = 0.510; Wald = 0.285	2.953 (0.648–13.458); p = 0.162; B = 1.083; S.E. = 0.774; Wald = 1.957
	yes	-	1 (ref)	1 (ref)
disease-related
disease localization		p = 0.002; Wald = 12.466	p = 0.009; Wald = 9.447	p = 0.025; Wald = 7.342
	pulmonary TB	1 (ref)	1 (ref)	1 (ref)
	extra-pulmonary TB	5.279 (1.983–14.049); p = 0.001; B = 1.664; S.E. = 0.499; Wald = 11.097	4.702 (1.630–13.560); p = 0.004; B = 1.548; S.E. = 0.540; Wald = 8.206	9.894 (1.825–53.654); p = 0.008; B = 2.292; S.E. = 0.863; Wald = 7.060
	pulmonary and extra-pulmonary TB	0.788 (0.205–3.038); p = 0.730; B = -0.238; S.E. = 0.688; Wald = 0.120	0.769 (0.199–2.978); p = 0.704; B = -0.262; S.E. = 0.691; Wald = 0.144	3.609 (0.637–20.434); p = 0.147; B = 1.283; S.E. = 0.885; Wald = 2.105
Omnibus Test (chi-square/p)		12.555/ p = 0.002	12.843/ p = 0.005	56.253/ p<0.001
Cox & Snell R 2		0.095	0.097	0.360
Nagelkerke R 2		0.141	0.144	0.536
Hosmer and Lemeshow (chi-square/p)		0.000/ p = 1.000	0.081/ p = 0.994	6.225/ p = 0.514
n		126