Table 1. Number of sequences belonging to each sub-family.
AMPylation subfamilies | No. of sequences used to build profiles | No. of sequences from nr search using profiles | No. of sequences used for phylogenetic analysis |
---|---|---|---|
Fic | 452 | 3614 | 1346a |
Doc | 99 | 1466 | 531a |
AvrB | 9 | 21 | — |
AnkX | 7 | 27 | — |
AT of GS-ATase | 89 | 1356 | 831b |
AR of GS-ATase | 198 | 1369 | 759b |
aSequences at 60% redundancy.
bSequences at 95% redundancy
*NCBI accession numbers corresponding to each set of sequences mentioned above are available in Supplementary File 2