Table 1.
Summary of SNPs detected in sequenced clones from population 1, where yellow indicates the presence of the SNP.
| #CHROM POS | GENE(S) | Effect | Codon | AA | REF | ALT | GSY2737 | GSY2736 | GSY2734 | GSY2735 | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| chrII | 371865 | TIP1 | DOWNSTREAM | T | A | ||||||
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| chrII | 275399 | GAL7 | STOP_GAINED | taC/taA | Y/* | G | T | ||||
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| chrIV | 727219 | YCF1 | NON_SYNONYMOUS | atG/atT | M/I | C | A | ||||
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| chrVI | 102407 | LPD1 | NON_SYNONYMOUS | Gca/Cca | A/P | C | G | ||||
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| chrVII | 348047 | MAD1 | NON_SYNONYMOUS | gAt/gTt | D/V | A | T | ||||
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| chrVII | 994190 | INTERGENIC | C | T | |||||||
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| chrVIII | 81842 | ETP1, PRS3 | INTERGENIC | G | T | ||||||
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| chrX | 172326 | URA2 | NON_SYNONYMOUS | atG/atT | M/I | C | A | ||||
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| chrXII | 221252 | YLR036C | DOWNSTREAM | G | T | ||||||
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| chrXIII | 891857 | PSE1 | NON_SYNONYMOUS | cTa/cCa | L/P | A | G | ||||
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| chrXV | 593444 | LSC1 | STOP_GAINED | Caa/Taa | Q/* | C | T | ||||
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| chrVIII | 58100 | RIM4 | NON_SYNONYMOUS | atG/atT | M/I | G | T | ||||
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| chrVIII | 85558 | LTR | G | A | |||||||
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| chrXII | 893967 | VAC14 | NON_SYNONYMOUS | Gca/Tca | A/S | G | T | ||||
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| chrXIV | 674942 | BUD17 | NON_SYNONYMOUS | aCg/aAg | T/K | C | A | ||||
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| chrII | 237120 | ECM15, HTB2 | DOWNSTREAM | G | T | ||||||
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| chrXI | 609417 | PXL1 | NON_SYNONYMOUS | Cat/Aat | H/N | C | A | ||||
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