Table 3. PCR primer sequences used in this study.
Name | Sequence (5’ to 3’) | Notes |
---|---|---|
PN333 | TCGGGAAGTTTCAGGGTACCCATGG | KpnI Flipper |
PN334 | TCAGGCTCTAACTCGAGTCTAGC | XhoI Flipper |
PN335 | TGGTGACAACTCGAGAATGGTTTGACG | XhoI Add Back Flipper |
PN526 | TTTTGAGCTCATTACACATACAATATGC | SacI Flipper |
PN527 | GCTTTGAGGACCGCGGATCTCATTATTC | SacII Flipper |
PN185* | GATGCCAGGTTAGATACTTCGATTGTAGACG | HBR1 K66R mutation |
PN224* | CAGGTACACCTTCTTGTGGGAAATCATCTC | HBR1 G19S mutation |
PN266* | CAGGTACACCTGGGTGTTCTAAATCATCTC | HBR1 G21S mutation |
PN442 | GCTATCACAAGGTCCCGGTG | Detect; 81 nt 5’ of PN333 |
PN372 | TGTTTTGTGGTGCCGTGCAAG | Detect; SAP2 promoter |
PN357 | TGTGCACCTATCCGACCAAGG | Detect; CaSAT1 |
PN615 | TGCTGTGCGTGCTTTTATTC | Detect; 558 nt 3’ of PN526 |
*Paired with reverse complement