1. Pectin |
Homogalacturonan |
Land plants and Charophyta green algae |
Pectin methylesterase |
Pectinate/ Pectate (demethylated) |
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EMP |
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Pectin acetylesterase |
Deacetylated polymer |
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Pectin lyase, pectate lyase |
Oligosaccharides with 4-deoxy-α-D-galact-4-enuronosyl groups at their non-reducing ends |
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Exopolygalacturonate lyase |
digalacturonate |
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Oligogalacturonide lyase |
5-dehydro-4-deoxy-D-glucuronate |
ExuT symporter |
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galacturonic acid |
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Rhamnogalacturonan I |
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Pectin methylesterase |
Demethylated RGI |
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Pectin acetylesterase |
Deacetylated RGI |
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Rhamnogalacturonan endolyase |
Oligosaccharides with L-rhamnopyranose at the reducing end and 4-deoxy-4,5-unsaturated D-galactopyranosyl uronic acid at the non-reducing end |
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Rhamnogalacturonan exolyase |
disaccharide 2-O-(4-deoxy-beta-L-threo-hex-4-enopyranuronosyl)-alpha-L-rhamnopyranose |
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d-4,5-unsaturated β-glucuronyl hydrolase |
rhamnose |
Rhamnose:proton symporter |
BMC |
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5-dehydro-4-deoxy-D-glucuronate |
ExuT symporter |
EMP |
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β-galactosidase |
Galactose |
Galactose:sodium symporter |
EMP |
Alginates |
Brown Algae |
Poly β-D-mannuronate lyase |
Oligosaccharides with 4-deoxy-α-L-erythro-hex-4-enopyranuronosyl groups at their non-reducing ends |
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Oligoalginate lyase |
4-deoxy-α-L-erythro-hex-4-enopyranuronose spontaneously converted to 5-dehydro-4-deoxy-D-glucuronate |
ExuT symporter |
EMP |
2. Fucans |
Homofucan |
Brown Algae |
Sulfatase |
Unsulfated homofucans |
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Fucoidan lyase-like protein (hypothetical protein) |
Unsaturated, non-sulfated di- and tetrasaccharides |
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α-L-fucosidase |
Fucose |
Fucose:proton symporter |
BMC |
Xylofucogalactan/ xylofucomannan |
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Sulfatase |
Unsulfated fucans |
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α-L-fucosidase |
Fucose |
Fucose:proton symporter |
BMC |
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β-glucuronidase |
Glucuronic acid |
ExuT symporter |
EMP |
Xylofucoglucuronan |
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Sulfatase |
Unsulfated fucans |
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α-L-fucosidase |
Fucose |
Fucose:proton symporter |
BMC |
3. Ulvans |
Chlorophyta |
Sulfatase |
Unsulfated ulvans |
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Heparin lyase |
Unsaturated, non-sulfated di- and tetrasaccharides |
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d-4,5-unsaturated β-glucuronyl hydrolase |
5-dehydro-4-deoxy-D-glucuronate |
ExuT symporter |
EMP |
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Rhamnose |
Rhamnose:proton symporter |
BMC |
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Xylose |
Xylose:proton symporter |
PPP |
4. Xyloglucan |
Land plants, some green algae |
endo-β-1,4-glucanase |
A mixture of oligosaccharides |
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α-1,2-fucosidase |
Fucose |
Fucose:proton symporter |
BMC |
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β-galactosidase |
Galactose |
Galactose:sodium symporter |
EMP |
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β-glucosidase |
Glucose |
Glucose:sodium symporter |
EMP |
5. Hydroxyproline-rich glycoprotein (HRGP) |
Extensin |
Land plants, some green algae |
β-L-arabinofuranosidase |
Arabinose |
ABC transporter |
PPP |
Arabinogalactan protein (AGP) |
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endo-β-1,6-galactanase (?)
|
galactan oligosaccharides |
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β-glucuronidase |
Glucuronic acid |
ExuT symporter |
EMP |
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α-Fucosidase |
Fucose |
Fucose:proton symporter |
BMC |
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α-rhamnosidase |
Rhamnose |
Rhamnose:proton symporter |
BMC |
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β-galactosidase |
Galactose |
Galactose:sodium symporter |
EMP |
6. Others |
Extracellular proteins |
All organisms |
Non-specific endopeptidases |
Oligopeptides |
ABC transporter |
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Dipeptidases |
Dipeptides |
ABC transporter |
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Dipeptide peptidase, aminopeptidases, or Carboxypeptidases |
Free amino acids |
Symporters for Pro, Ala, Asp, Glu, Gly, cationic aaABC transporter for Pro |
EMP (Asp and Glu) |
Starch |
Land plants, and green algae storage compounds |
α-amylase |
Oligosaccharides |
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α-glucosidase |
Glucose |
Glucose:sodium symporter |
EMP |
Trehalose |
Brown algae storage compound |
Trehalase |
Glucose |
Glucose:sodium symporter |
EMP |
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Glucose-1-P |
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Poly-D-galactosamine |
Some fungi such as Aspergillus, and Neurocrassa
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Endo1,4-poly-D-galactosaminidase |
Galactosamine |
PTS |
EMP |