Table 1. Statistics of DGE sequencing.
Category | Parameter | Sequencing results | |||
---|---|---|---|---|---|
MC1 | MT2 | AC3 | AT4 | ||
Raw tag | Total no. of tags | 5951527 | 6091042 | 6114520 | 5879545 |
No. of distinct tags | 342727 | 318139 | 247567 | 266527 | |
Clean tag | Total number | 5734967 | 5888090 | 5976544 | 5730194 |
Distinct Tag number | 143198 | 133826 | 111624 | 119204 | |
All tags mapping to gene | No. of distinct tags | 43787 | 47908 | 35183 | 23368 |
Distinct Tag % of clean tag | 30.58% | 35.80% | 31.52% | 19.60% | |
All tag-mapped genes | No. of genes | 22193 | 22620 | 18098 | 13828 |
% of reference genes | 38.44% | 39.17% | 34.45% | 26.32% | |
Unambiguous tag-mapped genes | No. of genes | 22113 | 22547 | 18006 | 13734 |
% of reference genes | 38.30% | 39.05% | 34.27% | 26.14% |
1The MEAM1 whitefly transferred from cotton to cotton.
2The MEAM1 whitefly transferred from cotton to tobacco.
3The Asia II 3 whitefly transferred from cotton to cotton.
4The Asia II 3 whitefly transferred from cotton to tobacco.