TABLE 1.
Summary of genome characteristics
| Characteristic | P. temperata NC19 | P. luminescens TT01 | P. asymbiotica ATCC 43949 |
|---|---|---|---|
| Genome size (bp) | 5,232,343 | 5,688,987 | 5,064,808 |
| Scaffolds | 17 | 1 | 1 |
| GC content (%) | 43.3 | 42.8 | 42.2 |
| Total no. of protein-coding genes | 4,555 | 4,895 | 4,417 |
| No. of genes for: | |||
| rRNA | 3 | 3 | 3 |
| tRNA | 69 | 85 | 85 |
| CDS | 4,808 | 4,905 | 4,403 |
| Transposases | 129 | 111 | 61 |
| Integrases | 8 | 22 | 17 |
| Excisionase | 6 | 3 | 11 |
| Other phage related | 140 | 206 | 131 |
| Other plasmid | 0 | 0 | 1 |
| Resolvase | 6 | 3 | 2 |
| Reverse transcriptase | 5 | 1 | 0 |
| No. of CRISPRa | 4 | 5 | 6 |
| Accession no. | AYSJ00000000.1 | NC_005126.1 | NC_012962.1 |
| NC_012961.1 | |||
| Reference | 35 | 36 |
a
CRISPR, clustered regularly interspaced short palindromic repeats.