Table 3. QTL for SAM height.
| QTL | Chromosome | LOD | PVE | Effecta | cM Rangeb | Coincident SAM QTL |
|---|---|---|---|---|---|---|
| SAM_height_1 | 1 | 4.80 | 7% | 4.06 | 717.91−729.41 | |
| SAM_height_2 | 1 | 3.45 | 5% | 3.62 | 1041.41−1052.91 | Arc length, Plastochron internode |
| SAM_height_3 | 2 | 3.96 | 6% | 3.74 | 301.21−310.91 | Arc length |
| SAM_height_4 | 3 | 4.90 | 9% | −4.58 | 791.21−813.11 | Arc length, volume |
| SAM_height_5 | 5 | 4.82 | 7% | 4.33 | 772.71−781.71 | Arc length, volume |
| SAM_height_6 | 5 | 9.25 | 16% | 6.10 | 892.81−895.01 | Arc length, volume |
| SAM_height_7 | 6 | 5.62 | 9% | 4.49 | 303.01−317.71 | Arc length, volume |
| SAM_height_8 | 6 | 3.03 | 4% | −3.02 | 489.71−499.31 |
QTL, quantitative trait loci; SAM, shoot apical meristem; LOD, logarithm (base 10) of odds; PVE, phenotypic variation explained.
a
Effect is substitution of Mo17 allele with B73.
b
QTL intervals calculated by 1-LOD drop.