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. 2015 Jun 6;16:37. doi: 10.1186/s12865-015-0096-x

Table 2.

Primers used for quantitative polymerase chain reaction assay

Primer Sequence Annealing temperature (°C) Expected product size (bp)
CC10 [S] 5'-GGACACACCCTCCAGTTATGA-3' 60 126
[A] 5'-ATGATGCTTTCTCTGGGCTTT-3'
IL-33 [S] 5'-ACAGCAAAGTGGAAGAACACAG-3' 60 162
[A] 5'-CCTTTTGGTGGTTTCTCTCCTA-3'
TSLP [S] 5’-CCCAGGCTATTCGGAAACTCA-3’ 60 118
[A] 5'-ACGCCACAATCCTTGTAATTGTG-3'
IL-25 [S] 5'-AAGGAGATGGTTGGTCAGAAGA-3' 58 182
[A] 5'-CTCCTAATCGCAAAAGAGCATC-3'
Osteopontin [S] 5'-CAACCGAAGTTTTCACTCCAG-3' 58 173
[A] 5'-ATTCAACTCCTCGCTTTCCAT-3'
CCL20/MIP-3α [S] 5'-GAATCAGAAGCAGCAAGCAAC-3' 60 209
[A] 5'-TTTTTACTGAGGAGACGCACAA-3'
CXCL19/MIG [S] 5'-GTTCTTTTCCTCTTGGGCATC-3' 60 108
[A] 5'-GATAGTCCCTTGGTTGGTGCT-3'
CCL17/TARC [S] 5'-GCCCCACTGAAGATGCTG-3' 60 204
[A] 5'-GCCCTGCACAGTTACAAAAAC-3'
CCL22/MDC [S] 5'-TGATTACGTCCGTTACCGTCT-3' 60 179
[A] 5'-AGTAGGCTCTTCATTGGCTCA-3'
CXCL5/ENA-78 [S] 5'-TTACAGACCACGCAAGGAGTT-3' 60 105
[A] 5'-GTTCTTCAGGGAGGCTACCAC-3'
ECP [S] 5'-TGCCCTCATAACAGAACTCTCA-3' 60 216
[A] 5'-GATGGTGGTATCCAGGTGAACT-3'
MDA-5 [S] 5'-GTTTGGCAGAAGGAAGTGTCA-3' 60 213
[A] 5'-CTGTAGGGAGGCAGATGATGA-3'
TLR2 [S] 5'-ATGCTGCCATTCTCATTCTTCT-3' 60 101
[A] 5'-CTCCAGGTAGGTCTTGGTGTTC-3'
TLR3 [S]5'-CGCTAAAAAGTGAAGAACTGGA-3' 60 100
[A]5'-TGAAAACACCCTGGAGAAAACT-3'
TLR4 [S] 5'-CTTCTCAACCAAGAACCTGGAC-3' 60 158
[A] 5'-TAGAGAGGTGGCTTAGGCTCTG-3'
TLR9 [S] 5'-CTACAACCGCATCGTCAAACT-3' 60 217
[A] 5'-ATTCAGCCAGGAGAGAGAACTG-3'
EGF [S] 5'-CTCATCACTGGTTGTGGTTCAT-3' 60 133
[A] 5'-CATAAAACCTTCACGACACGAA-3'
MMP9 [S] 5'-ACCACCACAACATCACCTATTG-3' 60 166
[A] 5'-ACACCAAACTGGATGACGATG-3'
TGF-β1 [S] 5'-CAGCAACAATTCCTGGCGATA-3' 57 136
[A] 5'-AAGGCGAAAGCCCTCAATTT-3'
CD86 [S] 5'-CAGCCTCTTCTTCTCTCAGCAG-3' 60 100
[A] 5'-CTCACTGGGGTCTGTGGTCT-3'
OX40L [S] 5'-AAATGAAGAGGAGCAAGGAGTG-3' 60 247
[A] 5'-CTGGGAAAGCAAAATGGTAAAG-3'
ICOSL [S] 5'-AGGTTTTGAGCGTTGAGGTTAC-3' 60 165
[A] 5'-GGCTGTTGTCCGTCTTATTGAT-3'
PD-L1 [S] 5'-GAACTACCTCTGGCACATCCTC-3' 60 126
[A] 5'-CACATCCATCATTCTCCCTTTT-3'
CD80 [S] 5'-TAATAAGCAAAGGGAGCACTGG-3' 60 140
[A] 5'-GCACAGGAGTCTGATGAACAAA-3'
GAPDH [S] 5'-ACCCAGAAGACTGTGGATGG-3' 61 201
[A] 5'-TTCTAGACGGCAGGTCAGGT-3'

CC10, Clara cell 10-kD protein; IL, interleukin; TSLP, thymic stromal lymphopoietin; CCL, CC chemokine ligand; MIP-3α, macrophage inflammatory protein-3α; CXCL, CXC chemokine ligand; MIG, monokine induced by interferon-γ; TARC, thymus and activation-regulated chemokine; MDC, macrophage-derived chemokine; ENA-78, epithelial neutrophil-activating peptide-78; ECP, eosinophilic cationic protein; MDA-5, melanoma differentiation-associated gene 5; TLR, Toll-like receptor; EGF, epidermal growth factor; MMP9, matrix metalloproteinase 9; TGF-β1, transforming growth factor-β1; OX40L, OX40 ligand; ICOSL, inducible costimulator ligand; PD-L1, programmed cell death ligand 1; GAPDH, glyceraldehydes-3-phosphate dehydrogenase