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. Author manuscript; available in PMC: 2016 Jun 15.
Published in final edited form as: Cancer. 2015 Mar 2;121(12):1949–1956. doi: 10.1002/cncr.29320

Table 2.

Associations of nominally significant vitamin D pathway SNPS and lethal prostate cancer stratified by high vs. low 25(OH)D

Gene: SNP (Major/Minor allele) OR* and 95% CI for low 25(OH)D strata p-value OR* and 95% CI for high 25(OH)D strata p-value p-interaction#
VDR:rs2239186(A,G) 1.26(0.88-1.78) 0.20 1.44(1.01-2.05) 0.04 0.44
VDR:rs2189480(G,T) 1.44(1.05-1.97) 0.02 1.12(0.83-1.50) 0.47 0.60
VDR:rs2283342(A,G) 1.07(0.72-1.57) 0.75 1.59(1.09-2.32) 0.02 0.15
VDR:rs12721364(G,A) 1.34(0.89-2.02) 0.16 0.67(0.44-1.02) 0.06 0.05
VDR:rs10875693(T,A) 0.66(0.46-0.96) 0.03 1.16(0.82-1.64) 0.42 0.23
VDR:rs4760648(C,T) 0.85(0.63-1.14) 0.27 1.23(0.90-1.69) 0.19 0.03
GC:rs1155563(T,C) 0.96(0.69-1.33) 0.81 1.54(1.10-2.14) 0.01 0.12
GC:rs1491716(G,A) 0.50(0.25-0.98) 0.04 1.25(0.68-2.30) 0.48 0.70
GC:rs6817912(C,T) 1.93(1.00-3.70) 0.05 0.93(0.48-1.81) 0.83 0.72
GC:rs12640179(C,G) 1.81(0.99-3.31) 0.05 0.72(0.36-1.48) 0.37 0.03
CYP27A1:rs647952(A,G) 0.20(0.05-0.74) 0.02 1.28(0.48-3.41) 0.63 0.51
CYP2R1:rs2060793(G,A) 1.34(1.00-1.79) 0.05 1.13(0.84-1.52) 0.42 0.03
CYP2R1:rs12794714(G,A) 0.69(0.51-0.93) 0.01 0.86(0.63-1.16) 0.32 0.04
CYP2R1:rs1562902(T,C) 1.41(1.04-1.90) 0.03 1.05(0.79-1.42) 0.72 0.004
CYP2R1:rs10832312(T,C) 1.65(1.02-2.65) 0.04 0.88(0.52-1.49) 0.64 0.04
CYP2R1:rs11023374(T,C) 0.75(0.53-1.07) 0.11 0.97(0.68-1.38) 0.85 0.01
CYP24A1:rs2585413(G,A) 0.93(0.67-1.29) 0.67 0.71(0.51-0.98) 0.04 0.48
CYP24A1:rs2585415(G,A) 0.99(0.72-1.35) 0.93 0.70(0.51-0.96) 0.03 0.21
CYP24A1:rs927650(C,T) 0.99(0.73-1.33) 0.94 1.50(1.11-2.04) 0.009 0.19
CYP24A1:rs3787555(C,A) 1.40(1.00-1.96) 0.05 0.81(0.57-1.16) 0.25 0.78
RXRA:rs1536475(G,A) 1.09(0.73-1.61) 0.69 0.79(0.51-1.20) 0.27 0.03
*

Per-minor allele odds ratio for fatal prostate cancer, adjusted for age at diagnosis

#

Wald p-value for SNP coded (0,1,2)*25(OH)D (continuous); 25(OH)D was standardized by cohort, season, and laboratory assay batch.